backend crash on DELETE, reproducible locally
Dear list members !
I am running this delete statement via psql
DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
against a
name | server_version
setting | 11.0 (Debian 11.0-1)
postgres@hermes:~$ psql -d gnumed_v21
Ausgabeformat ist �wrapped�.
psql (11.0 (Debian 11.0-1))
on Debian
Distributor ID: Debian
Description: Debian GNU/Linux testing (buster)
Release: testing
Codename: buster
postgresql-11:
Installiert: 11.0-1
Installationskandidat: 11.0-1
Versionstabelle:
*** 11.0-1 990
990 http://httpredir.debian.org/debian buster/main i386 Packages
500 http://httpredir.debian.org/debian unstable/main i386 Packages
and it crashes the backend it is running on.
The DELETE is part of a lengthy database upgrade process. If
I comment out that statement the entire process runs find
start to end (there are - succeeding - SQL statements after
the failing DELETE).
The cluster in question
Ver Cluster Port Status Owner Data directory Log file
10 main 5433 down postgres /var/lib/postgresql/10/main /var/log/postgresql/postgresql-10-main.log
11 main 5432 online postgres /var/lib/postgresql/11/main /var/log/postgresql/postgresql-11-main.log
was upgraded from PG10 to PG11 without a hitch earlier today
using pg_upgrade through Debian's pg_upgradecluster
(dump/restore method).
The backend crash is reproducible each time I run the above
DELETE. If I bump log_min_messages to debug5 the following
ensues:
2018-11-01 13:09:55 GMT LOG: 00000: Datenbanksystem ist bereit, um Verbindungen anzunehmen
2018-11-01 13:09:55 GMT ORT: reaper, postmaster.c:2888
2018-11-01 13:19:03 GMT LOG: 00000: SIGHUP empfangen, Konfigurationsdateien werden neu geladen
2018-11-01 13:19:03 GMT ORT: SIGHUP_handler, postmaster.c:2529
2018-11-01 13:19:04 GMT LOG: 00000: Parameter �log_min_messages� auf �debug5� gesetzt
2018-11-01 13:19:04 GMT ORT: ProcessConfigFileInternal, guc-file.l:456
2018-11-01 13:19:04 GMT DEBUG: 00000: sending signal 1 to process 5703
2018-11-01 13:19:04 GMT ORT: SignalSomeChildren, postmaster.c:3920
2018-11-01 13:19:04 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:04 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:04 GMT DEBUG: 00000: checkpointer updated shared memory configuration values
2018-11-01 13:19:04 GMT ORT: UpdateSharedMemoryConfig, checkpointer.c:1362
2018-11-01 13:19:04 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:04 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:04 GMT DEBUG: 00000: received inquiry for database 0
2018-11-01 13:19:04 GMT ORT: pgstat_recv_inquiry, pgstat.c:5640
2018-11-01 13:19:04 GMT DEBUG: 00000: writing stats file "/run/postgresql/global.stat"
2018-11-01 13:19:04 GMT ORT: pgstat_write_statsfiles, pgstat.c:4684
2018-11-01 13:19:04 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:04 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:04 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT DEBUG: 00000: forked new backend, pid=6264 socket=13
2018-11-01 13:19:25 GMT ORT: BackendStartup, postmaster.c:4055
2018-11-01 13:19:25 GMT LOG: 00000: Verbindung empfangen: Host=[local]
2018-11-01 13:19:25 GMT ORT: BackendInitialize, postmaster.c:4209
2018-11-01 13:19:25 GMT DEBUG: 00000: postgres child[6264]: starting with (
2018-11-01 13:19:25 GMT ORT: BackendRun, postmaster.c:4348
2018-11-01 13:19:25 GMT DEBUG: 00000: postgres
2018-11-01 13:19:25 GMT ORT: BackendRun, postmaster.c:4351
2018-11-01 13:19:25 GMT DEBUG: 00000: )
2018-11-01 13:19:25 GMT ORT: BackendRun, postmaster.c:4353
2018-11-01 13:19:25 GMT DEBUG: 00000: InitPostgres
2018-11-01 13:19:25 GMT ORT: InitPostgres, postinit.c:573
2018-11-01 13:19:25 GMT DEBUG: 00000: my backend ID is 3
2018-11-01 13:19:25 GMT ORT: SharedInvalBackendInit, sinvaladt.c:324
2018-11-01 13:19:25 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:25 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT DEBUG: 00000: snapshot of 0+0 running transaction ids (lsn 0/46947AC4 oldest xid 128763 latest complete 128762 next xid 128763)
2018-11-01 13:19:25 GMT ORT: LogCurrentRunningXacts, standby.c:1000
2018-11-01 13:19:25 GMT DEBUG: 00000: rehashing catalog cache id 8 for pg_auth_members; 17 tups, 8 buckets
2018-11-01 13:19:25 GMT ORT: RehashCatCache, catcache.c:883
2018-11-01 13:19:25 GMT DEBUG: 00000: received password packet
2018-11-01 13:19:25 GMT ORT: recv_password_packet, auth.c:718
2018-11-01 13:19:25 GMT LOG: 00000: Verbindung autorisiert: Benutzer=gm-dbo Datenbank=gnumed_v21
2018-11-01 13:19:25 GMT ORT: PerformAuthentication, postinit.c:279
2018-11-01 13:19:25 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:25 GMT LOCATION: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:25 GMT LOCATION: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT LOG: 00000: statement: set default_transaction_read_only to off;
2018-11-01 13:19:25 GMT LOCATION: exec_simple_query, postgres.c:952
2018-11-01 13:19:25 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:25 GMT LOCATION: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:25 GMT LOCATION: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:25 GMT LOG: 00000: statement: DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
2018-11-01 13:19:25 GMT LOCATION: exec_simple_query, postgres.c:952
2018-11-01 13:19:26 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:26 GMT ORT: reaper, postmaster.c:2781
2018-11-01 13:19:26 GMT DEBUG: 00000: Serverprozess (PID 6264) wurde von Signal 11 beendet: Segmentation fault
2018-11-01 13:19:26 GMT DETAIL: Der fehlgeschlagene Prozess f�hrte aus: DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
2018-11-01 13:19:26 GMT ORT: LogChildExit, postmaster.c:3579
2018-11-01 13:19:26 GMT LOG: 00000: Serverprozess (PID 6264) wurde von Signal 11 beendet: Segmentation fault
2018-11-01 13:19:26 GMT DETAIL: Der fehlgeschlagene Prozess f�hrte aus: DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
2018-11-01 13:19:26 GMT ORT: LogChildExit, postmaster.c:3579
2018-11-01 13:19:26 GMT LOG: 00000: aktive Serverprozesse werden abgebrochen
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3299
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5703
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3344
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5699
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3426
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5698
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3438
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5700
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3450
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5701
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3474
2018-11-01 13:19:26 GMT DEBUG: 00000: sending SIGQUIT to process 5702
2018-11-01 13:19:26 GMT ORT: HandleChildCrash, postmaster.c:3504
2018-11-01 13:19:26 GMT DEBUG: 00000: writing stats file "pg_stat/global.stat"
2018-11-01 13:19:26 GMT ORT: pgstat_write_statsfiles, pgstat.c:4684
2018-11-01 13:19:26 GMT DEBUG: 00000: writing stats file "pg_stat/db_139580.stat"
2018-11-01 13:19:26 GMT ORT: pgstat_write_db_statsfile, pgstat.c:4841
2018-11-01 13:19:26 GMT DEBUG: 00000: removing temporary stats file "/run/postgresql/db_139580.stat"
2018-11-01 13:19:26 GMT ORT: pgstat_write_db_statsfile, pgstat.c:4922
2018-11-01 13:19:26 GMT DEBUG: 00000: writing stats file "pg_stat/db_0.stat"
2018-11-01 13:19:26 GMT ORT: pgstat_write_db_statsfile, pgstat.c:4841
2018-11-01 13:19:26 GMT DEBUG: 00000: removing temporary stats file "/run/postgresql/db_0.stat"
2018-11-01 13:19:26 GMT ORT: pgstat_write_db_statsfile, pgstat.c:4922
2018-11-01 13:19:26 GMT DEBUG: 00000: shmem_exit(-1): 0 before_shmem_exit callbacks to make
2018-11-01 13:19:26 GMT ORT: shmem_exit, ipc.c:237
2018-11-01 13:19:26 GMT DEBUG: 00000: shmem_exit(-1): 0 on_shmem_exit callbacks to make
2018-11-01 13:19:26 GMT ORT: shmem_exit, ipc.c:270
2018-11-01 13:19:26 GMT DEBUG: 00000: proc_exit(-1): 0 callbacks to make
2018-11-01 13:19:26 GMT ORT: proc_exit_prepare, ipc.c:197
2018-11-01 13:19:26 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:26 GMT ORT: reaper, postmaster.c:2781
2018-11-01 13:19:26 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:26 GMT ORT: reaper, postmaster.c:2781
2018-11-01 13:19:26 GMT WARNUNG: 57P02: Verbindung wird abgebrochen wegen Absturz eines anderen Serverprozesses
2018-11-01 13:19:26 GMT DETAIL: Der Postmaster hat diesen Serverprozess angewiesen, die aktuelle Transaktion zur�ckzurollen und die Sitzung zu beenden, weil ein anderer Serverprozess abnormal beendet wurde und m�glicherweise das Shared Memory verf�lscht hat.
2018-11-01 13:19:26 GMT TIPP: In einem Moment sollten Sie wieder mit der Datenbank verbinden und Ihren Befehl wiederholen k�nnen.
2018-11-01 13:19:26 GMT ORT: quickdie, postgres.c:2640
2018-11-01 13:19:26 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:26 GMT ORT: reaper, postmaster.c:2781
2018-11-01 13:19:26 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:26 GMT ORT: reaper, postmaster.c:2781
And the backends restart automatically:
2018-11-01 13:19:26 GMT LOG: 00000: alle Serverprozesse beendet; initialisiere neu
2018-11-01 13:19:26 GMT ORT: PostmasterStateMachine, postmaster.c:3823
2018-11-01 13:19:26 GMT DEBUG: 00000: shmem_exit(1): 0 before_shmem_exit callbacks to make
2018-11-01 13:19:26 GMT ORT: shmem_exit, ipc.c:237
2018-11-01 13:19:26 GMT DEBUG: 00000: shmem_exit(1): 5 on_shmem_exit callbacks to make
2018-11-01 13:19:26 GMT ORT: shmem_exit, ipc.c:270
2018-11-01 13:19:26 GMT DEBUG: 00000: cleaning up dynamic shared memory control segment with ID 1958734660
2018-11-01 13:19:26 GMT ORT: dsm_postmaster_shutdown, dsm.c:377
2018-11-01 13:19:26 GMT DEBUG: 00000: invoking IpcMemoryCreate(size=33415168)
2018-11-01 13:19:26 GMT ORT: CreateSharedMemoryAndSemaphores, ipci.c:164
2018-11-01 13:19:26 GMT DEBUG: 00000: mmap(33554432) with MAP_HUGETLB failed, huge pages disabled: Nicht gen�gend Hauptspeicher verf�gbar
2018-11-01 13:19:26 GMT ORT: CreateAnonymousSegment, pg_shmem.c:485
2018-11-01 13:19:26 GMT DEBUG: 00000: SlruScanDirectory invoking callback on pg_notify/0000
2018-11-01 13:19:26 GMT ORT: SlruScanDirectory, slru.c:1398
2018-11-01 13:19:26 GMT DEBUG: 00000: entferne Datei �pg_notify/0000�
2018-11-01 13:19:26 GMT ORT: SlruInternalDeleteSegment, slru.c:1253
2018-11-01 13:19:26 GMT DEBUG: 00000: dynamic shared memory system will support 158 segments
2018-11-01 13:19:26 GMT ORT: dsm_postmaster_startup, dsm.c:170
2018-11-01 13:19:26 GMT DEBUG: 00000: created dynamic shared memory control segment 156941574 (2540 bytes)
2018-11-01 13:19:26 GMT ORT: dsm_postmaster_startup, dsm.c:195
2018-11-01 13:19:26 GMT LOG: 00000: Datenbanksystem wurde unterbrochen; letzte bekannte Aktion am 2018-11-01 13:09:54 GMT
2018-11-01 13:19:26 GMT ORT: StartupXLOG, xlog.c:6388
2018-11-01 13:19:40 GMT DEBUG: 00000: Checkpoint-Eintrag ist bei 0/46946098
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6646
2018-11-01 13:19:40 GMT DEBUG: 00000: redo record is at 0/46946098; shutdown true
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6724
2018-11-01 13:19:40 GMT DEBUG: 00000: next transaction ID: 0:128763; next OID: 147771
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6728
2018-11-01 13:19:40 GMT DEBUG: 00000: next MultiXactId: 1; next MultiXactOffset: 0
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6731
2018-11-01 13:19:40 GMT DEBUG: 00000: oldest unfrozen transaction ID: 561, in database 1
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6734
2018-11-01 13:19:40 GMT DEBUG: 00000: oldest MultiXactId: 1, in database 1
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6737
2018-11-01 13:19:40 GMT DEBUG: 00000: commit timestamp Xid oldest/newest: 15720/128762
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6741
2018-11-01 13:19:40 GMT DEBUG: 00000: Grenze f�r Transaktionsnummern�berlauf ist 2147484208, begrenzt durch Datenbank mit OID 1
2018-11-01 13:19:40 GMT ORT: SetTransactionIdLimit, varsup.c:368
2018-11-01 13:19:40 GMT DEBUG: 00000: Grenze f�r MultiXactId-�berlauf ist 2147483648, begrenzt durch Datenbank mit OID 1
2018-11-01 13:19:40 GMT ORT: SetMultiXactIdLimit, multixact.c:2269
2018-11-01 13:19:40 GMT DEBUG: 00000: starting up replication slots
2018-11-01 13:19:40 GMT ORT: StartupReplicationSlots, slot.c:1110
2018-11-01 13:19:40 GMT DEBUG: 00000: starting up replication origin progress state
2018-11-01 13:19:40 GMT ORT: StartupReplicationOrigin, origin.c:699
2018-11-01 13:19:40 GMT LOG: 00000: Datenbanksystem wurde nicht richtig heruntergefahren; automatische Wiederherstellung l�uft
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:6879
2018-11-01 13:19:40 GMT DEBUG: 00000: resetting unlogged relations: cleanup 1 init 0
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelations, reinit.c:57
2018-11-01 13:19:40 GMT DEBUG: 00000: unlinked file "base/33083/34131"
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:258
2018-11-01 13:19:40 GMT DEBUG: 00000: unlinked file "base/33083/35593"
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:258
2018-11-01 13:19:40 GMT DEBUG: 00000: unlinked file "base/33083/35594"
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:258
2018-11-01 13:19:40 GMT LOG: 00000: Redo beginnt bei 0/46946100
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:7150
2018-11-01 13:19:40 GMT LOG: 00000: Redo fertig bei 0/4699B5A0
2018-11-01 13:19:40 GMT ORT: StartupXLOG, xlog.c:7422
2018-11-01 13:19:40 GMT DEBUG: 00000: resetting unlogged relations: cleanup 0 init 1
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelations, reinit.c:57
2018-11-01 13:19:40 GMT DEBUG: 00000: copying base/33083/34131_init to base/33083/34131
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:307
2018-11-01 13:19:40 GMT DEBUG: 00000: copying base/33083/35594_init to base/33083/35594
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:307
2018-11-01 13:19:40 GMT DEBUG: 00000: copying base/33083/35593_init to base/33083/35593
2018-11-01 13:19:40 GMT ORT: ResetUnloggedRelationsInDbspaceDir, reinit.c:307
2018-11-01 13:19:40 GMT DEBUG: 00000: performing replication slot checkpoint
2018-11-01 13:19:40 GMT ORT: CheckPointReplicationSlots, slot.c:1074
2018-11-01 13:19:41 GMT DEBUG: 00000: attempting to remove WAL segments older than log file 000000000000000000000045
2018-11-01 13:19:41 GMT ORT: RemoveOldXlogFiles, xlog.c:3909
2018-11-01 13:19:41 GMT DEBUG: 00000: Grenze f�r MultiXactId-�berlauf ist 2147483648, begrenzt durch Datenbank mit OID 1
2018-11-01 13:19:41 GMT ORT: SetMultiXactIdLimit, multixact.c:2269
2018-11-01 13:19:41 GMT DEBUG: 00000: MultiXact-Member-Stopp-Limit ist jetzt 4294914944, basierend auf MultiXact 1
2018-11-01 13:19:41 GMT ORT: SetOffsetVacuumLimit, multixact.c:2632
2018-11-01 13:19:41 GMT DEBUG: 00000: shmem_exit(0): 1 before_shmem_exit callbacks to make
2018-11-01 13:19:41 GMT ORT: shmem_exit, ipc.c:237
2018-11-01 13:19:41 GMT DEBUG: 00000: shmem_exit(0): 4 on_shmem_exit callbacks to make
2018-11-01 13:19:41 GMT ORT: shmem_exit, ipc.c:270
2018-11-01 13:19:41 GMT DEBUG: 00000: proc_exit(0): 2 callbacks to make
2018-11-01 13:19:41 GMT ORT: proc_exit_prepare, ipc.c:197
2018-11-01 13:19:41 GMT DEBUG: 00000: exit(0)
2018-11-01 13:19:41 GMT ORT: proc_exit, ipc.c:150
2018-11-01 13:19:41 GMT DEBUG: 00000: shmem_exit(-1): 0 before_shmem_exit callbacks to make
2018-11-01 13:19:41 GMT ORT: shmem_exit, ipc.c:237
2018-11-01 13:19:41 GMT DEBUG: 00000: shmem_exit(-1): 0 on_shmem_exit callbacks to make
2018-11-01 13:19:41 GMT ORT: shmem_exit, ipc.c:270
2018-11-01 13:19:41 GMT DEBUG: 00000: proc_exit(-1): 0 callbacks to make
2018-11-01 13:19:41 GMT ORT: proc_exit_prepare, ipc.c:197
2018-11-01 13:19:41 GMT DEBUG: 00000: reaping dead processes
2018-11-01 13:19:41 GMT ORT: reaper, postmaster.c:2781
2018-11-01 13:19:41 GMT DEBUG: 00000: Autovacuum-Launcher startet
2018-11-01 13:19:41 GMT ORT: AutoVacLauncherMain, autovacuum.c:442
2018-11-01 13:19:41 GMT DEBUG: 00000: starte Background-Worker-Prozess �logical replication launcher�
2018-11-01 13:19:41 GMT ORT: do_start_bgworker, postmaster.c:5656
2018-11-01 13:19:41 GMT DEBUG: 00000: InitPostgres
2018-11-01 13:19:41 GMT ORT: InitPostgres, postinit.c:573
2018-11-01 13:19:41 GMT DEBUG: 00000: my backend ID is 1
2018-11-01 13:19:41 GMT ORT: SharedInvalBackendInit, sinvaladt.c:324
2018-11-01 13:19:41 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT LOG: 00000: Datenbanksystem ist bereit, um Verbindungen anzunehmen
2018-11-01 13:19:41 GMT ORT: reaper, postmaster.c:2888
2018-11-01 13:19:41 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: Logical-Replication-Launcher startet
2018-11-01 13:19:41 GMT ORT: ApplyLauncherMain, launcher.c:988
2018-11-01 13:19:41 GMT DEBUG: 00000: InitPostgres
2018-11-01 13:19:41 GMT ORT: InitPostgres, postinit.c:573
2018-11-01 13:19:41 GMT DEBUG: 00000: my backend ID is 2
2018-11-01 13:19:41 GMT ORT: SharedInvalBackendInit, sinvaladt.c:324
2018-11-01 13:19:41 GMT DEBUG: 00000: received inquiry for database 0
2018-11-01 13:19:41 GMT ORT: pgstat_recv_inquiry, pgstat.c:5640
2018-11-01 13:19:41 GMT DEBUG: 00000: writing stats file "/run/postgresql/global.stat"
2018-11-01 13:19:41 GMT ORT: pgstat_write_statsfiles, pgstat.c:4684
2018-11-01 13:19:41 GMT DEBUG: 00000: checkpointer updated shared memory configuration values
2018-11-01 13:19:41 GMT ORT: UpdateSharedMemoryConfig, checkpointer.c:1362
2018-11-01 13:19:41 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: StartTransaction(1) name: unnamed; blockState: DEFAULT; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:41 GMT DEBUG: 00000: CommitTransaction(1) name: unnamed; blockState: STARTED; state: INPROGRESS, xid/subid/cid: 0/1/0
2018-11-01 13:19:41 GMT ORT: ShowTransactionStateRec, xact.c:5151
2018-11-01 13:19:56 GMT DEBUG: 00000: snapshot of 0+0 running transaction ids (lsn 0/4699D564 oldest xid 128764 latest complete 128763 next xid 128764)
2018-11-01 13:19:56 GMT ORT: LogCurrentRunningXacts, standby.c:1000
2018-11-01 13:20:19 GMT LOG: 00000: SIGHUP empfangen, Konfigurationsdateien werden neu geladen
2018-11-01 13:20:19 GMT ORT: SIGHUP_handler, postmaster.c:2529
2018-11-01 13:20:19 GMT LOG: 00000: Parameter �log_min_messages� auf �notice� gesetzt
2018-11-01 13:20:19 GMT ORT: ProcessConfigFileInternal, guc-file.l:456
What else can I provide/test/look into ?
(In case anyone remembers: GNUmed uses psycopg2 for upgrades
and its databases default to default_transaction_read_only=true
but I have taken both aspects out of the loop manually for
the above test.)
Thanks for any hints,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Karsten Hilbert <Karsten.Hilbert@gmx.net> writes:
I am running this delete statement via psql
DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
Doesn't look particularly special ...
What else can I provide/test/look into ?
Stack trace would be helpful, self-contained test case even better.
https://wiki.postgresql.org/wiki/Generating_a_stack_trace_of_a_PostgreSQL_backend
regards, tom lane
I am running this delete statement via psql
DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
and it crashes the backend it is running on.
For what it is worth I have identified the physical file
gnumed_v21=# select pg_relation_filepath('ref.auto_hint');
pg_relation_filepath
----------------------
base/139580/111088
(1 Zeile)
and phyically copied that to another place (so there's no
read error on the disk - but the DELETE would perhaps ask for
a physical write test ?).
Attached the output of pg_filedump which, to me, doesn't seem
to show anything out of the ordinary either.
Corrupt index should not be the case because the databse is
REINDEXed during the upgrade process before the failing
statement.
Will attempt to get a stack trace ...
Thanks,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Attachments:
111088_fsm.pg_filedump-v-f-i-k.txttext/plain; charset=us-asciiDownload
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111088.pg_filedump-v-f-i-k.txttext/plain; charset=us-asciiDownload
*******************************************************************
* PostgreSQL File/Block Formatted Dump Utility - Version 11.0
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* Options used: -v -f -i -k
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* Dump created on: Thu Nov 1 15:37:24 2018
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1498: 474e556d 65642064 65666175 6c740765 GNUmed default.e
14a8: 6ed55345 4c454354 205f2827 4544433a n.SELECT _('EDC:
14b8: 20272920 7c7c2074 6f5f6368 61722865 ') || to_char(e
14c8: 64632c20 27595959 59204d6f 6e204444 dc, 'YYYY Mon DD
14d8: 27292046 524f4d20 636c696e 2e706174 ') FROM clin.pat
14e8: 69656e74 20574845 52452066 6b5f6964 ient WHERE fk_id
14f8: 656e7469 7479203d 2049445f 41435449 entity = ID_ACTI
1508: 56455f50 41544945 4e543b VE_PATIENT;
Item 9 -- Length: 509 Offset: 4280 (0x10b8) Flags: NORMAL
XMIN: 127401 XMAX: 0 CID|XVAC: 0
Block Id: 0 linp Index: 9 Attributes: 13 Size: 28
infomask: 0x0803 (HASNULL|HASVARWIDTH|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
10b8: a9f10100 00000000 00000000 00000000 ................
10c8: 09000d00 03081cff 1e000000 de350000 .............5..
10d8: 00000000 244e0cdf 981c0200 676d2d64 ....$N......gm-d
10e8: 626f0000 00000000 00000000 00000000 bo..............
10f8: 00000000 00000000 00000000 00000000 ................
1108: 00000000 00000000 00000000 00000000 ................
1118: 00000000 00000000 00000000 09000000 ................
1128: 34030000 53454c45 43542028 0a095345 4...SELECT (..SE
1138: 4c454354 20645f69 2e67656e 64657220 LECT d_i.gender
1148: 3d20276d 27204652 4f4d2064 656d2e69 = 'm' FROM dem.i
1158: 64656e74 69747920 645f6920 57484552 dentity d_i WHER
1168: 450a0909 645f692e 706b203d 2049445f E...d_i.pk = ID_
1178: 41435449 56455f50 41544945 4e540a29 ACTIVE_PATIENT.)
1188: 20414e44 20455849 53545320 280a0953 AND EXISTS (..S
1198: 454c4543 54203120 46524f4d 20636c69 ELECT 1 FROM cli
11a8: 6e2e7061 7469656e 74205748 4552450a n.patient WHERE.
11b8: 0909666b 5f696465 6e746974 79203d20 ..fk_identity =
11c8: 49445f41 43544956 455f5041 5449454e ID_ACTIVE_PATIEN
11d8: 540a0909 09414e44 0a090965 64632049 T....AND...edc I
11e8: 53204e4f 54204e55 4c4c0a29 3b235175 S NOT NULL.);#Qu
11f8: 65737469 6f6e6162 6c652045 44436554 estionable EDCeT
1208: 68657265 20697320 616e2045 44432064 here is an EDC d
1218: 6f63756d 656e7465 6420666f 72207468 ocumented for th
1228: 6973204d 414c4520 70617469 656e742e is MALE patient.
1238: 011f474e 556d6564 20646566 61756c74 ..GNUmed default
1248: 07656ed5 53454c45 4354205f 28274544 .en.SELECT _('ED
1258: 433a2027 29207c7c 20746f5f 63686172 C: ') || to_char
1268: 28656463 2c202759 59595920 4d6f6e20 (edc, 'YYYY Mon
1278: 44442729 2046524f 4d20636c 696e2e70 DD') FROM clin.p
1288: 61746965 6e742057 48455245 20666b5f atient WHERE fk_
1298: 6964656e 74697479 203d2049 445f4143 identity = ID_AC
12a8: 54495645 5f504154 49454e54 3b TIVE_PATIENT;
Item 10 -- Length: 891 Offset: 3388 (0x0d3c) Flags: NORMAL
XMIN: 127841 XMAX: 0 CID|XVAC: 0
Block Id: 0 linp Index: 10 Attributes: 13 Size: 28
infomask: 0x0803 (HASNULL|HASVARWIDTH|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
0d3c: 61f30100 00000000 00000000 00000000 a...............
0d4c: 0a000d00 03081cff 1e000000 0f360000 .............6..
0d5c: 00000000 3bc315e2 981c0200 676d2d64 ....;.......gm-d
0d6c: 626f0000 00000000 00000000 00000000 bo..............
0d7c: 00000000 00000000 00000000 00000000 ................
0d8c: 00000000 00000000 00000000 00000000 ................
0d9c: 00000000 00000000 00000000 0a000000 ................
0dac: cc050000 53454c45 43542028 0a09092d ....SELECT (...-
0dbc: 2d206e6f 74206465 63656173 65640a09 - not deceased..
0dcc: 0953454c 45435420 64656365 61736564 .SELECT deceased
0ddc: 20697320 4e554c4c 2046524f 4d206465 is NULL FROM de
0dec: 6d2e6964 656e7469 74792057 48455245 m.identity WHERE
0dfc: 20706b20 3d204944 5f414354 4956455f pk = ID_ACTIVE_
0e0c: 50415449 454e540a 09292041 4e44204e PATIENT..) AND N
0e1c: 4f542045 58495354 5320280a 09092d2d OT EXISTS (...--
0e2c: 206e6f20 74657461 6e757320 73686f74 no tetanus shot
0e3c: 20646f63 756d656e 7465640a 09095345 documented...SE
0e4c: 4c454354 20312046 524f4d20 636c696e LECT 1 FROM clin
0e5c: 2e765f70 61745f76 61636373 34696e64 .v_pat_vaccs4ind
0e6c: 69636174 696f6e0a 09095748 4552450a ication...WHERE.
0e7c: 09090970 6b5f7061 7469656e 74203d20 ...pk_patient =
0e8c: 49445f41 43544956 455f5041 5449454e ID_ACTIVE_PATIEN
0e9c: 540a0909 0909414e 440a0909 09696e64 T.....AND....ind
0eac: 69636174 696f6e20 3d202774 6574616e ication = 'tetan
0ebc: 7573270a 09090909 414e440a 09090964 us'.....AND....d
0ecc: 6174655f 67697665 6e203e20 6e6f7728 ate_given > now(
0edc: 29202d20 27313020 79656172 73273a3a ) - '10 years'::
0eec: 696e7465 7276616c 0a09094f 52444552 interval...ORDER
0efc: 2042590a 09090964 6174655f 67697665 BY....date_give
0f0c: 6e204445 53430a09 094c494d 49542031 n DESC...LIMIT 1
0f1c: 0a293b43 54657461 6e75732d 496d7066 .);CTetanus-Impf
0f2c: 67203e20 3130204a 61687265 20285354 g > 10 Jahre (ST
0f3c: 494b4f29 774c6574 7a746520 54657461 IKO)wLetzte Teta
0f4c: 6e757369 6d706675 6e672076 6f72206d nusimpfung vor m
0f5c: 65687220 616c7320 3130204a 61687265 ehr als 10 Jahre
0f6c: 6e20646f 6b756d65 6e746965 72742e01 n dokumentiert..
0f7c: 17535449 4b4f2032 30313607 64650000 .STIKO 2016.de..
0f8c: ac040000 53454c45 43542063 6f616c65 ....SELECT coale
0f9c: 73636520 280a0928 53454c45 43540a09 sce (..(SELECT..
0fac: 09274c65 747a7465 20546574 616e7573 .'Letzte Tetanus
0fbc: 696d7066 756e673a 2027207c 7c20746f impfung: ' || to
0fcc: 5f636861 72286461 74655f67 6976656e _char(date_given
0fdc: 2c202759 59595920 4d6f6e20 44442729 , 'YYYY Mon DD')
0fec: 0a094652 4f4d2063 6c696e2e 765f7061 ..FROM clin.v_pa
0ffc: 745f7661 63637334 696e6469 63617469 t_vaccs4indicati
100c: 6f6e0a09 57484552 450a0909 706b5f70 on..WHERE...pk_p
101c: 61746965 6e74203d 2049445f 41435449 atient = ID_ACTI
102c: 56455f50 41544945 4e540a09 0909414e VE_PATIENT....AN
103c: 440a0909 696e6469 63617469 6f6e203d D...indication =
104c: 20277465 74616e75 73270a09 4f524445 'tetanus'..ORDE
105c: 52204259 0a090964 6174655f 67697665 R BY...date_give
106c: 6e204445 53430a09 4c494d49 54203129 n DESC..LIMIT 1)
107c: 2c0a0927 6b65696e 65205465 74616e75 ,..'keine Tetanu
108c: 73696d70 66756e67 20646f6b 756d656e simpfung dokumen
109c: 74696572 74270a29 20617320 7265636f tiert'.) as reco
10ac: 6d6d656e 64617469 6f6e3b mmendation;
Item 11 -- Length: 706 Offset: 2680 (0x0a78) Flags: NORMAL
XMIN: 127860 XMAX: 127860 CID|XVAC: 0
Block Id: 0 linp Index: 11 Attributes: 13 Size: 28
infomask: 0x2093 (HASNULL|HASVARWIDTH|XMAX_KEYSHR_LOCK|XMAX_LOCK_ONLY|UPDATED)
t_bits: [0]: 0xff [1]: 0x0f
0a78: 74f30100 74f30100 00000000 00000000 t...t...........
0a88: 0b000d00 93201cff 0f000000 52350000 ..... ......R5..
0a98: 01000000 98ba89e2 981c0200 676d2d64 ............gm-d
0aa8: 626f0000 00000000 00000000 00000000 bo..............
0ab8: 00000000 00000000 00000000 00000000 ................
0ac8: 00000000 00000000 00000000 00000000 ................
0ad8: 00000000 00000000 00000000 03000000 ................
0ae8: 30070000 53454c45 43542028 0a095345 0...SELECT (..SE
0af8: 4c454354 0a09092d 2d206b6e 6f776e20 LECT...-- known
0b08: 444f420a 0909645f 692e646f 62206973 DOB...d_i.dob is
0b18: 206e6f74 204e554c 4c0a0909 09414e44 not NULL....AND
0b28: 0a09092d 2d206e6f 74206465 63656173 ...-- not deceas
0b38: 65640a09 09645f69 2e646563 65617365 ed...d_i.decease
0b48: 64206973 204e554c 4c0a0946 524f4d0a d is NULL..FROM.
0b58: 09096465 6d2e6964 656e7469 74792064 ..dem.identity d
0b68: 5f690a09 57484552 450a0909 645f692e _i..WHERE...d_i.
0b78: 706b203d 2049445f 41435449 56455f50 pk = ID_ACTIVE_P
0b88: 41544945 4e540a29 20414e44 20280a09 ATIENT.) AND (..
0b98: 53454c45 43540a09 09616765 28645f69 SELECT...age(d_i
0ba8: 2e646f62 29203e3d 20273335 20796561 .dob) >= '35 yea
0bb8: 7273273a 3a696e74 65727661 6c0a0946 rs'::interval..F
0bc8: 524f4d0a 09096465 6d2e6964 656e7469 ROM...dem.identi
0bd8: 74792064 5f690a09 57484552 450a0909 ty d_i..WHERE...
0be8: 645f692e 706b203d 2049445f 41435449 d_i.pk = ID_ACTI
0bf8: 56455f50 41544945 4e540a29 20414e44 VE_PATIENT.) AND
0c08: 204e4f54 20455849 53545320 280a0953 NOT EXISTS (..S
0c18: 454c4543 54203120 46524f4d 20636c69 ELECT 1 FROM cli
0c28: 6e2e765f 656d725f 6a6f7572 6e616c0a n.v_emr_journal.
0c38: 09574845 52450a09 09706b5f 70617469 .WHERE...pk_pati
0c48: 656e7420 3d204944 5f414354 4956455f ent = ID_ACTIVE_
0c58: 50415449 454e540a 09090941 4e440a09 PATIENT....AND..
0c68: 096e6172 72617469 7665207e 2a20272e .narrative ~* '.
0c78: 2a636865 636b7570 2e2a270a 09090941 *checkup.*'....A
0c88: 4e440a09 09616765 28636c69 6e5f7768 ND...age(clin_wh
0c98: 656e2920 3c202732 20796561 7273273a en) < '2 years':
0ca8: 3a696e74 65727661 6c0a293b 33474b56 :interval.);3GKV
0cb8: 2d436865 636b7570 20c3bc62 657266c3 -Checkup ..berf.
0cc8: a46c6c69 677d4465 72205061 7469656e .llig}Der Patien
0cd8: 74206861 74746520 696e2064 656e206c t hatte in den l
0ce8: 65747a74 656e2032 204a6168 72656e20 etzten 2 Jahren
0cf8: 6b65696e 656e2047 4b562d43 6865636b keinen GKV-Check
0d08: 75702e39 64696520 c3bc626c 69636865 up.9die ..bliche
0d18: 6e205665 7264c3a4 63687469 67656e01 n Verd..chtigen.
0d28: 1f474e55 6d656420 64656661 756c7407 .GNUmed default.
0d38: 6465 de
Block 1 ********************************************************
<Header> -----
Block Offset: 0x00002000 Offsets: Lower 44 (0x002c)
Block: Size 8192 Version 4 Upper 1108 (0x0454)
LSN: logid 0 recoff 0x46a08fc0 Special 8192 (0x2000)
Items: 5 Free Space: 1064
Checksum: 0x67c1 Prune XID: 0x00000000 Flags: 0x0000 ()
Length (including item array): 44
0000: 00000000 c08fa046 c1670000 2c005404 .......F.g..,.T.
0010: 00200420 00000000 2c99a40d 4091d80f . . ....,...@...
0020: 588cca09 c0882a07 5484d808 X.....*.T...
<Data> ------
Item 1 -- Length: 1746 Offset: 6444 (0x192c) Flags: NORMAL
XMIN: 127843 XMAX: 0 CID|XVAC: 0
Block Id: 1 linp Index: 1 Attributes: 13 Size: 28
infomask: 0x0903 (HASNULL|HASVARWIDTH|XMIN_COMMITTED|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
192c: 63f30100 00000000 00000000 00000100 c...............
193c: 01000d00 03091cff 1e000000 11360000 .............6..
194c: 00000000 301228e2 981c0200 676d2d64 ....0.(.....gm-d
195c: 626f0000 00000000 00000000 00000000 bo..............
196c: 00000000 00000000 00000000 00000000 ................
197c: 00000000 00000000 00000000 00000000 ................
198c: 00000000 00000000 00000000 0b000000 ................
199c: 000b0000 2d2d203e 36302079 65617273 ....-- >60 years
19ac: 0a53454c 45435420 45584953 54532028 .SELECT EXISTS (
19bc: 0a095345 4c454354 20312046 524f4d20 ..SELECT 1 FROM
19cc: 64656d2e 6964656e 74697479 20574845 dem.identity WHE
19dc: 52450a09 0928706b 203d2049 445f4143 RE...(pk = ID_AC
19ec: 54495645 5f504154 49454e54 290a0909 TIVE_PATIENT)...
19fc: 09414e44 0a090928 646f6220 3c206e6f .AND...(dob < no
1a0c: 77282920 2d202736 30207965 61727327 w() - '60 years'
1a1c: 3a3a696e 74657276 616c290a 2920414e ::interval).) AN
1a2c: 44204558 49535453 20280a2d 2d204173 D EXISTS (.-- As
1a3c: 74686d61 2f434f50 442f456d 70687973 thma/COPD/Emphys
1a4c: 656d2f4c 756e6765 6e666962 726f7365 em/Lungenfibrose
1a5c: 0a53454c 45435420 31204652 4f4d2063 .SELECT 1 FROM c
1a6c: 6c696e2e 765f7072 6f626c65 6d5f6c69 lin.v_problem_li
1a7c: 73742057 48455245 0a092870 6b5f7061 st WHERE..(pk_pa
1a8c: 7469656e 74203d20 49445f41 43544956 tient = ID_ACTIV
1a9c: 455f5041 5449454e 54290a09 09414e44 E_PATIENT)...AND
1aac: 0a092809 2d2d2073 686f756c 64206368 ..(.-- should ch
1abc: 65636b20 49435043 2f494344 31300a09 eck ICPC/ICD10..
1acc: 09287072 6f626c65 6d20696c 696b6520 .(problem ilike
1adc: 27256173 74686d61 2527290a 0909094f '%asthma%')....O
1aec: 520a0909 2870726f 626c656d 20696c69 R...(problem ili
1afc: 6b652027 25434f50 44252729 0a090909 ke '%COPD%')....
1b0c: 4f520a09 09287072 6f626c65 6d20696c OR...(problem il
1b1c: 696b6520 2725656d 70687973 656d2527 ike '%emphysem%'
1b2c: 290a0909 094f520a 0909280a 09090928 )....OR...(....(
1b3c: 70726f62 6c656d20 696c696b 65202725 problem ilike '%
1b4c: 66696272 6f732527 290a0909 0909414e fibros%').....AN
1b5c: 440a0909 09280a09 09090928 70726f62 D....(.....(prob
1b6c: 6c656d20 696c696b 65202725 6c756e67 lem ilike '%lung
1b7c: 2527290a 09090909 094f520a 09090909 %')......OR.....
1b8c: 2870726f 626c656d 20696c69 6b652027 (problem ilike '
1b9c: 2570756c 6d6f6e25 27290a09 0909290a %pulmon%')....).
1bac: 0909290a 09290a29 20414e44 204e4f54 ..)..).) AND NOT
1bbc: 20455849 53545320 280a2d2d 206b6569 EXISTS (.-- kei
1bcc: 6e652049 6d706675 6e672050 6e65756d ne Impfung Pneum
1bdc: 6f6b6f6b 6b656e0a 53454c45 43542031 okokken.SELECT 1
1bec: 2046524f 4d20636c 696e2e76 5f706174 FROM clin.v_pat
1bfc: 5f766163 63733469 6e646963 6174696f _vaccs4indicatio
1c0c: 6e205748 4552450a 0928706b 5f706174 n WHERE..(pk_pat
1c1c: 69656e74 203d2049 445f4143 54495645 ient = ID_ACTIVE
1c2c: 5f504154 49454e54 290a0909 414e440a _PATIENT)...AND.
1c3c: 0928696e 64696361 74696f6e 203d2027 .(indication = '
1c4c: 706e6575 6d6f636f 63637573 27290a29 pneumococcus').)
1c5c: 4b4c756e 67652d3e 506e6575 6d6f6b6f KLunge->Pneumoko
1c6c: 6b6b656e 2d496d70 66672028 4447502f kken-Impfg (DGP/
1c7c: 4447494d 29974c75 6e67656e 6b72616e DGIM).Lungenkran
1c8c: 6b6520c3 a46c7465 72203630 20736f6c ke ..lter 60 sol
1c9c: 6c656e20 65696e65 20506e65 756d6f6b len eine Pneumok
1cac: 6f6b6b65 6e696d70 66756e67 20616e67 okkenimpfung ang
1cbc: 65626f74 656e2062 656b6f6d 6d656e2e eboten bekommen.
1ccc: 015f2247 656d6569 6e73616d 206b6c75 ._"Gemeinsam klu
1cdc: 6720656e 74736368 65696465 6e222028 g entscheiden" (
1cec: 4447494d 3a204447 502c2032 30313629 DGIM: DGP, 2016)
1cfc: 07646500 f80b0000 53454c45 43540a28 .de.....SELECT.(
1d0c: 092d2d20 6578706c 61696e0a 0953454c .-- explain..SEL
1d1c: 45435420 45274573 20697374 206b6569 ECT E'Es ist kei
1d2c: 6e652049 6d706675 6e672067 6567656e ne Impfung gegen
1d3c: 20506e65 756d6f6b 6f6b6b65 6e20646f Pneumokokken do
1d4c: 6b756d65 6e746965 72742e5c 6e5c6e27 kumentiert.\n\n'
1d5c: 0a09097c 7c204527 45732073 6f6c6c74 ...|| E'Es sollt
1d6c: 65206569 6e652049 6d706675 6e672061 e eine Impfung a
1d7c: 6e676562 6f74656e 20776572 64656e2c ngeboten werden,
1d8c: 20776569 6c5c6e27 0a09092d 2d206167 weil\n'...-- ag
1d9c: 650a0909 7c7c2027 20646173 20416c74 e...|| ' das Alt
1dac: 65722028 27207c7c 20747269 6d286c65 er (' || trim(le
1dbc: 6164696e 67202730 27206672 6f6d2074 ading '0' from t
1dcc: 6f5f6368 6172286a 75737469 66795f69 o_char(justify_i
1ddc: 6e746572 76616c28 6e6f7728 29202d20 nterval(now() -
1dec: 646f6229 2c202759 59592729 29207c7c dob), 'YYY')) ||
1dfc: 20452729 203e2036 30204a61 68726520 E') > 60 Jahre
1e0c: 69737420 756e645c 6e270a09 46524f4d ist und\n'..FROM
1e1c: 2064656d 2e696465 6e746974 79205748 dem.identity WH
1e2c: 45524520 706b203d 2049445f 41435449 ERE pk = ID_ACTI
1e3c: 56455f50 41544945 4e540a29 207c7c20 VE_PATIENT.) ||
1e4c: 280a092d 2d207072 6f626c65 6d0a0953 (..-- problem..S
1e5c: 454c4543 54202720 65696e20 4c756e67 ELECT ' ein Lung
1e6c: 656e7072 6f626c65 6d202227 207c7c20 enproblem "' ||
1e7c: 70726f62 6c656d20 7c7c2027 2220646f problem || '" do
1e8c: 6b756d65 6e746965 72742069 7374270a kumentiert ist'.
1e9c: 0946524f 4d20636c 696e2e76 5f70726f .FROM clin.v_pro
1eac: 626c656d 5f6c6973 74205748 4552450a blem_list WHERE.
1ebc: 09092870 6b5f7061 7469656e 74203d20 ..(pk_patient =
1ecc: 49445f41 43544956 455f5041 5449454e ID_ACTIVE_PATIEN
1edc: 54290a09 0909414e 440a0909 28092d2d T)....AND...(.--
1eec: 2073686f 756c6420 63686563 6b204943 should check IC
1efc: 50432f49 43443130 0a090909 2870726f PC/ICD10....(pro
1f0c: 626c656d 20696c69 6b652027 25617374 blem ilike '%ast
1f1c: 686d6125 27290a09 0909094f 520a0909 hma%').....OR...
1f2c: 09287072 6f626c65 6d20696c 696b6520 .(problem ilike
1f3c: 2725434f 50442527 290a0909 09094f52 '%COPD%').....OR
1f4c: 0a090909 2870726f 626c656d 20696c69 ....(problem ili
1f5c: 6b652027 25656d70 68797365 6d252729 ke '%emphysem%')
1f6c: 0a090909 094f520a 09090928 0a090909 .....OR....(....
1f7c: 09287072 6f626c65 6d20696c 696b6520 .(problem ilike
1f8c: 27256669 62726f73 2527290a 09090909 '%fibros%').....
1f9c: 09414e44 0a090909 09280a09 09090909 .AND.....(......
1fac: 2870726f 626c656d 20696c69 6b652027 (problem ilike '
1fbc: 256c756e 67252729 0a090909 0909094f %lung%').......O
1fcc: 520a0909 09090928 70726f62 6c656d20 R......(problem
1fdc: 696c696b 65202725 70756c6d 6f6e2527 ilike '%pulmon%'
1fec: 290a0909 0909290a 09090929 0a090929 ).....)....)...)
1ffc: 0a29 .)
Item 2 -- Length: 2028 Offset: 4416 (0x1140) Flags: NORMAL
XMIN: 127844 XMAX: 0 CID|XVAC: 0
Block Id: 1 linp Index: 2 Attributes: 13 Size: 28
infomask: 0x0803 (HASNULL|HASVARWIDTH|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
1140: 64f30100 00000000 00000000 00000100 d...............
1150: 02000d00 03081cff 1e000000 12360000 .............6..
1160: 00000000 645b28e2 981c0200 676d2d64 ....d[(.....gm-d
1170: 626f0000 00000000 00000000 00000000 bo..............
1180: 00000000 00000000 00000000 00000000 ................
1190: 00000000 00000000 00000000 00000000 ................
11a0: 00000000 00000000 00000000 0c000000 ................
11b0: 240f0000 0a53454c 4543540a 092d2d20 $....SELECT..--
11c0: 6265796f 6e642041 75677573 74203f20 beyond August ?
11d0: 2d3e2070 726f6261 626c7920 6f6e6c79 -> probably only
11e0: 2076616c 6964206f 6e207468 65204e6f valid on the No
11f0: 72746865 726e2048 656d6973 70686572 rthern Hemispher
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1220: 38290a41 4e442045 58495354 5320280a 8).AND EXISTS (.
1230: 092d2d20 3e363020 79656172 730a0953 .-- >60 years..S
1240: 454c4543 54203120 46524f4d 2064656d ELECT 1 FROM dem
1250: 2e696465 6e746974 79205748 4552450a .identity WHERE.
1260: 09092870 6b203d20 49445f41 43544956 ..(pk = ID_ACTIV
1270: 455f5041 5449454e 54290a09 0909414e E_PATIENT)....AN
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12a0: 6e746572 76616c29 0a292041 4e442045 nterval).) AND E
12b0: 58495354 5320280a 2d2d2041 7374686d XISTS (.-- Asthm
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12f0: 2e765f70 726f626c 656d5f6c 69737420 .v_problem_list
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1320: 41544945 4e54290a 0909414e 440a0928 ATIENT)...AND..(
1330: 092d2d20 73686f75 6c642063 6865636b .-- should check
1340: 20494350 432f4943 4431300a 09092870 ICPC/ICD10...(p
1350: 726f626c 656d2069 6c696b65 20272561 roblem ilike '%a
1360: 7374686d 61252729 0a090909 4f520a09 sthma%')....OR..
1370: 09287072 6f626c65 6d20696c 696b6520 .(problem ilike
1380: 2725434f 50442527 290a0909 094f520a '%COPD%')....OR.
1390: 09092870 726f626c 656d2069 6c696b65 ..(problem ilike
13a0: 20272565 6d706879 73656d25 27290a09 '%emphysem%')..
13b0: 09094f52 0a090928 0a090909 2870726f ..OR...(....(pro
13c0: 626c656d 20696c69 6b652027 25666962 blem ilike '%fib
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13f0: 20696c69 6b652027 256c756e 67252729 ilike '%lung%')
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1430: 0a09290a 2920414e 44204e4f 54204558 ..).) AND NOT EX
1440: 49535453 20280a2d 2d206b65 696e6520 ISTS (.-- keine
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1490: 77697220 696d2053 65707465 6d626572 wir im September
14a0: 2073696e 640a5345 4c454354 20312046 sind.SELECT 1 F
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14c0: 61636373 34696e64 69636174 696f6e20 accs4indication
14d0: 57484552 450a0928 706b5f70 61746965 WHERE..(pk_patie
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16d0: 20272064 61732041 6c746572 20282720 ' das Alter ('
16e0: 7c7c2074 72696d28 6c656164 696e6720 || trim(leading
16f0: 27302720 66726f6d 20746f5f 63686172 '0' from to_char
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1920: 290a0909 09290a09 09290a29 )....)...).)
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infomask: 0x0803 (HASNULL|HASVARWIDTH|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
0c58: 65f30100 00000000 00000000 00000100 e...............
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0c88: 626f0000 00000000 00000000 00000000 bo..............
0c98: 00000000 00000000 00000000 00000000 ................
0ca8: 00000000 00000000 00000000 00000000 ................
0cb8: 00000000 00000000 00000000 0d000000 ................
0cc8: 3c080000 53454c45 43542045 58495354 <...SELECT EXIST
0cd8: 5320280a 092d2d20 74616b65 73206f78 S (..-- takes ox
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0d48: 6174635f 73756273 74616e63 65203d20 atc_substance =
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0c50: 454e543b 0a ENT;.
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infomask: 0x0803 (HASNULL|HASVARWIDTH|XMAX_INVALID)
t_bits: [0]: 0xff [1]: 0x1e
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0484: 626f0000 00000000 00000000 00000000 bo..............
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04a4: 00000000 00000000 00000000 00000000 ................
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0594: 6973636f 6e74696e 75656420 4953204e iscontinued IS N
05a4: 554c4c29 204f5220 28646973 636f6e74 ULL) OR (discont
05b4: 696e7565 64203e20 6e6f7728 2929290a inued > now())).
05c4: 09090909 414e440a 09090928 6c617374 ....AND....(last
05d4: 5f636865 636b6564 5f776865 6e203c20 _checked_when <
05e4: 6e6f7728 29202d20 27312079 65617227 now() - '1 year'
05f4: 3a3a696e 74657276 616c290a 09293b4d ::interval)..);M
0604: 4f757464 61746564 20736d6f 6b696e67 Outdated smoking
0614: 20737461 74757320 646f6375 6d656e74 status document
0624: 6174696f 6e93536d 6f6b696e 67207374 ation.Smoking st
0634: 61747573 20776173 206c6173 74207265 atus was last re
0644: 636f7264 6564206d 6f726520 7468616e corded more than
0654: 206f6e65 20796561 72206167 6f20666f one year ago fo
0664: 72207468 69732073 6d6f6b65 722e0149 r this smoker..I
0674: 41574d46 204e564c 20536368 c3a4646c AWMF NVL Sch..dl
0684: 69636865 72205461 62616b67 65627261 icher Tabakgebra
0694: 75636807 656e0000 90080000 53454c45 uch.en......SELE
06a4: 43540a09 095f2827 536d6f6b 696e6720 CT..._('Smoking
06b4: 73746174 75732729 207c7c20 45275c6e status') || E'\n
06c4: 270a0909 7c7c2027 2027207c 7c205f28 '...|| ' ' || _(
06d4: 274c6173 74206368 65636b65 643a2729 'Last checked:')
06e4: 207c7c20 27202720 7c7c2074 6f5f6368 || ' ' || to_ch
06f4: 6172286c 6173745f 63686563 6b65645f ar(last_checked_
0704: 7768656e 2c20274d 6f6e2059 59595927 when, 'Mon YYYY'
0714: 290a0909 7c7c2028 63617365 0a090909 )...|| (case....
0724: 09776865 6e206861 726d6675 6c5f7573 .when harmful_us
0734: 655f7479 7065203d 20312074 68656e20 e_type = 1 then
0744: 45275c6e 27207c7c 205f2827 6861726d E'\n' || _('harm
0754: 66756c20 75736527 290a0909 09097768 ful use').....wh
0764: 656e2068 61726d66 756c5f75 73655f74 en harmful_use_t
0774: 79706520 3d203220 7468656e 2045275c ype = 2 then E'\
0784: 6e27207c 7c205f28 27616464 69637469 n' || _('addicti
0794: 6f6e2729 0a090909 09776865 6e206861 on').....when ha
07a4: 726d6675 6c5f7573 655f7479 7065203d rmful_use_type =
07b4: 20332074 68656e20 45275c6e 27207c7c 3 then E'\n' ||
07c4: 205f2827 70726576 696f7573 20616464 _('previous add
07d4: 69637469 6f6e2729 0a090909 656e6429 iction')....end)
07e4: 0a09097c 7c20636f 616c6573 63652845 ...|| coalesce(E
07f4: 275c6e20 27207c7c 205f2827 51756974 '\n ' || _('Quit
0804: 20646174 653a2729 207c7c20 27202720 date:') || ' '
0814: 7c7c2074 6f5f6368 61722864 6973636f || to_char(disco
0824: 6e74696e 7565642c 20275959 5959204d ntinued, 'YYYY M
0834: 6f6e2044 4427292c 20272729 0a09097c on DD'), '')...|
0844: 7c20636f 616c6573 63652845 275c6e20 | coalesce(E'\n
0854: 27207c7c 205f2827 4e6f7465 733a2729 ' || _('Notes:')
0864: 207c7c20 27202720 7c7c206e 6f746573 || ' ' || notes
0874: 2c202727 290a0946 524f4d0a 0909636c , '')..FROM...cl
0884: 696e2e76 5f6e6f6e 6272616e 645f696e in.v_nonbrand_in
0894: 74616b65 730a0957 48455245 20706b5f takes..WHERE pk_
08a4: 70617469 656e7420 3d204944 5f414354 patient = ID_ACT
08b4: 4956455f 50415449 454e543b IVE_PATIENT;
*** End of File Encountered. Last Block Read: 1 ***
On Thu, Nov 01, 2018 at 03:42:57PM +0100, Karsten Hilbert wrote:
Will attempt to get a stack trace ...
Meanwhile, in case it helps, an strace of the crash.
epoll_wait(7, [{EPOLLIN, {u32=47607120, u64=35184419695952}}], 1, -1) = 1
recv(13, "Q\0\0\0`DELETE FROM ref.auto_hint W"..., 8192, 0) = 97
gettimeofday({tv_sec=1541084179, tv_usec=197395}, NULL) = 0
gettimeofday({tv_sec=1541084179, tv_usec=197442}, NULL) = 0
write(2, "2018-11-01 14:56:19 GMT LOG: 00"..., 209) = 209
_llseek(45, 0, [16384], SEEK_END) = 0
_llseek(47, 0, [16384], SEEK_END) = 0
_llseek(48, 0, [16384], SEEK_END) = 0
_llseek(49, 0, [16384], SEEK_END) = 0
_llseek(45, 0, [16384], SEEK_END) = 0
kill(10377, SIGUSR1) = 0
_llseek(45, 0, [0], SEEK_SET) = 0
read(45, "\0\0\0\0\234\270\246F\10\373\0\0D\0x\n\0 \4 I\337\1\0\0\236\0\4\0\200\1\0"..., 8192) = 8192
_llseek(43, 81920, [81920], SEEK_SET) = 0
read(43, "\0\0\0\0x{pF8o\0\0\264\1\34\33\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
_llseek(44, 925696, [925696], SEEK_SET) = 0
read(44, "\0\0\0\0\310\324\231FE\231\1\0L\0l\1\0 \4 \0\0\0\0\24\234\326\7<\231\254\5"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139695", O_RDWR|O_LARGEFILE) = 56
read(56, "\0\0\0\0\350\347\220E`B\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
read(56, "\0\0\0\0h\347\220E\1,\0\0(\0\300\37\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/2612", O_RDWR|O_LARGEFILE) = 57
read(57, "\0\0\0\0\200\334s\1a\6\4\0(\0@\36\0 \4 \0\0\0\0\220\237\340\0 \237\340\0"..., 8192) = 8192
_llseek(43, 65536, [65536], SEEK_SET) = 0
read(43, "\0\0\0\0\214e^F\215w\0\0H\7`\n\360\37\4 \0\0\0\0x\212\30\0\344\237\30\0"..., 8192) = 8192
_llseek(44, 606208, [606208], SEEK_SET) = 0
read(44, "\0\0\0\0\20\206\237FVP\1\0p\0\230\3\0 \4 \361\360\1\0000\237\232\1T\236\266\1"..., 8192) = 8192
stat64("/usr/lib/postgresql/11/lib/plpgsql", 0xbfbda4ec) = -1 ENOENT (No such file or directory)
stat64("/usr/lib/postgresql/11/lib/plpgsql.so", {st_mode=S_IFREG|0644, st_size=197944, ...}) = 0
stat64("/usr/lib/postgresql/11/lib/plpgsql.so", {st_mode=S_IFREG|0644, st_size=197944, ...}) = 0
futex(0xb78b904c, FUTEX_WAKE_PRIVATE, 2147483647) = 0
openat(AT_FDCWD, "/usr/lib/postgresql/11/lib/plpgsql.so", O_RDONLY|O_CLOEXEC) = 58
read(58, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\300a\0\0004\0\0\0"..., 512) = 512
fstat64(58, {st_mode=S_IFREG|0644, st_size=197944, ...}) = 0
mmap2(NULL, 201108, PROT_READ, MAP_PRIVATE|MAP_DENYWRITE, 58, 0) = 0xb293f000
mmap2(0xb2944000, 102400, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 58, 0x5000) = 0xb2944000
mmap2(0xb295d000, 69632, PROT_READ, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 58, 0x1e000) = 0xb295d000
mmap2(0xb296e000, 12288, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 58, 0x2e000) = 0xb296e000
close(58) = 0
mprotect(0xb296e000, 8192, PROT_READ) = 0
openat(AT_FDCWD, "global/139651", O_RDWR|O_LARGEFILE) = 58
read(58, "\0\0\0\0\320\200zE\324\16\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
read(58, "\0\0\0\0P\200zE.+\0\0\320\0\310\35\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139719", O_RDWR|O_LARGEFILE) = 59
read(59, "\0\0\0\0x\347\232E\226s\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
read(59, "\0\0\0\0l\250\16F\22\340\0\0h\0\0\37\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
read(42, "\0\0\0\0`\235^\1\177\242\4\0\320\0\30\1\0 \4 \0\0\0\0T\237X\1\250\236X\1"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139606", O_RDWR|O_LARGEFILE) = 60
read(60, "\0\0\0\0\244E{F\206q\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
_llseek(60, 24576, [24576], SEEK_SET) = 0
read(60, "\0\0\0\0\224\272wE\re\0\0008\0\20\37\360\37\4 \0\0\0\0\350\237\20\0\320\2370\0"..., 8192) = 8192
read(60, "\0\0\0\0tD{F\34S\0\0\220\3\324\6\360\37\4 \0\0\0\0t\2078\0\300\237`\0"..., 8192) = 8192
brk(0x2e07000) = 0x2e07000
_llseek(41, 32768, [32768], SEEK_SET) = 0
read(41, "\0\0\0\0\320B{F\23I\0\0\230\6p\f\360\37\4 \0\0\0\0p\214\30\0\344\237\30\0"..., 8192) = 8192
_llseek(42, 335872, [335872], SEEK_SET) = 0
read(42, "\0\0\0\0 \"|FB\177\5\0\340\0\320\7\0 \4 Z\362\1\0\0\0\0\0\0\0\0\0"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139666", O_RDWR|O_LARGEFILE) = 61
read(61, "\0\0\0\0\244\326\212E\354\30\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
_llseek(61, 24576, [24576], SEEK_SET) = 0
read(61, "\0\0\0\0$\326\212E\217\235\0\0\220\0`\31\360\37\4 \0\0\0\0\350\237\20\0\254\237x\0"..., 8192) = 8192
_llseek(61, 8192, [8192], SEEK_SET) = 0
read(61, "\0\0\0\0008\365XF\253\246\0\0\30\2\214\3\360\37\4 \0\0\0\0000\205x\0\270\237p\0"..., 8192) = 8192
read(43, "\0\0\0\0H>mFL\204\0\0D\7l\n\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
brk(0x2e29000) = 0x2e29000
_llseek(31, 40960, [40960], SEEK_SET) = 0
read(31, "\0\0\0\0\270\244.F}8\0\0\220\1\354\22\360\37\4 \0\0\0\0\320\237@\0\254\237H\0"..., 8192) = 8192
_llseek(16, 2605056, [2605056], SEEK_SET) = 0
read(16, "\0\0\0\0\304\347\220FX\37\5\0\10\1d\7\0 \4 \0\0\0\0\0\0\0\0\0\0\0\0"..., 8192) = 8192
read(33, "\0\0\0\0\230x\375<b\341\0\0\204\0\240\1\0 \4 \0\0\0\0\364\235\30\4<\235j\1"..., 8192) = 8192
_llseek(34, 98304, [98304], SEEK_SET) = 0
read(34, "\0\0\0\0<\214vF\266\210\0\0\204\1\260\r\360\37\4 \0\0\0\0\250\237\220\0t\237h\0"..., 8192) = 8192
_llseek(35, 253952, [253952], SEEK_SET) = 0
read(35, "\0\0\0\0\304\35\240F\367\6\5\0x\0|\0\0 \4 \347\360\1\0\0\0\0\0\3\0\1\0"..., 8192) = 8192
_llseek(35, 1187840, [1187840], SEEK_SET) = 0
read(35, "\0\0\0\0\314=\240F\2\203\5\0\224\0\324\0\0 \4 \352\344\1\0T\227\376\4\0\0\0\0"..., 8192) = 8192
_llseek(35, 1122304, [1122304], SEEK_SET) = 0
read(35, "\0\0\0\0\\\\\240Fm\252\5\0H\0\0\2\0 \4 \0\0\0\0\200\235\374\4\0\233\374\4"..., 8192) = 8192
_llseek(35, 450560, [450560], SEEK_SET) = 0
read(35, "\0\0\0\0\360e\240FO\212\5\0\204\0008\27\0 \4 \347\360\1\0\0\0\0\0\4\0\1\0"..., 8192) = 8192
_llseek(44, 73728, [73728], SEEK_SET) = 0
read(44, "\0\0\0\0\330\206d\1\35\252\4\0\310\0\4\1\0 \4 \0\0\0\0P\237^\1\240\236`\1"..., 8192) = 8192
_llseek(43, 32768, [32768], SEEK_SET) = 0
read(43, "\0\0\0\0\214\311\206E\"\331\0\0@\7x\n\360\37\4 \0\0\0\0x\212\30\0\344\237\30\0"..., 8192) = 8192
_llseek(44, 188416, [188416], SEEK_SET) = 0
read(44, "\0\0\0\0`'f\1/4\4\0\304\0\360\0\0 \4 \0\0\0\0L\237h\1\230\236h\1"..., 8192) = 8192
_llseek(23, 49152, [49152], SEEK_SET) = 0
read(23, "\0\0\0\0$\236.F*Q\0\0\374\3D\24\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
_llseek(24, 73728, [73728], SEEK_SET) = 0
read(24, "\0\0\0\0\244\34\203E\314\225\0\0\324\5\0\t\360\37\4 \0\0\0\0\0\211 \0\340\237 \0"..., 8192) = 8192
_llseek(16, 417792, [417792], SEEK_SET) = 0
read(16, "\0\0\0\0\234\5\210F\2474\5\0\30\1\34\4\0 \4 \0\0\0\0t\237\30\1\350\236\30\1"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139770", O_RDWR|O_LARGEFILE) = 62
read(62, "\0\0\0\0P_\277E\233!\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
read(62, "\0\0\0\0\320^\277E/S\0\0\224\2|\30\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/2224", O_RDWR|O_LARGEFILE) = 63
read(63, "\0\0\0\0\270s\330<\311\265\1\0\34\3x\6\0 \4 -\250\1\0\2\0\1\0\264\237\222\0"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/90709", O_RDWR|O_LARGEFILE) = 64
read(64, "\0\0\0\0Tf\240F\375\242\0\0\34\0\320\37\374\37\4 \0\0\0\0\320\237R\0\0\0\0\0"..., 8192) = 8192
_llseek(43, 16384, [16384], SEEK_SET) = 0
read(43, "\0\0\0\0|\254\206EW\310\0\0@\7x\n\360\37\4 \0\0\0\0x\212\30\0\344\237\30\0"..., 8192) = 8192
_llseek(44, 131072, [131072], SEEK_SET) = 0
read(44, "\0\0\0\0\344Fe\1\305\372\4\0\300\0\f\1\0 \4 \0\0\0\0D\237r\1\210\236r\1"..., 8192) = 8192
_llseek(43, 40960, [40960], SEEK_SET) = 0
read(43, "\0\0\0\0\234\346\206E\245\361\0\0@\7x\n\360\37\4 \0\0\0\0x\212\30\0\344\237\30\0"..., 8192) = 8192
_llseek(44, 147456, [147456], SEEK_SET) = 0
read(44, "\0\0\0\0\360\206e\1\r\331\4\0\274\0H\1\0 \4 \0\0\0\0P\237`\1\210\236\216\1"..., 8192) = 8192
gettimeofday({tv_sec=1541084179, tv_usec=208768}, NULL) = 0
gettimeofday({tv_sec=1541084179, tv_usec=208829}, NULL) = 0
openat(AT_FDCWD, "base/139580/111805_fsm", O_RDWR|O_LARGEFILE) = -1 ENOENT (No such file or directory)
openat(AT_FDCWD, "base/139580/111805", O_RDWR|O_LARGEFILE) = 65
_llseek(65, 0, [8192], SEEK_END) = 0
_llseek(65, 0, [0], SEEK_SET) = 0
read(65, "\0\0\0\0hs\240FT.\0\0(\0L\23\0 \4 \0\0\0\0\224\234\330\6\374\231*\5"..., 8192) = 8192
read(45, "\0\0\0\0\274\324\246F^a\0\0,\0T\4\0 \4 \0\0\0\0,\231\244\r@\221\330\17"..., 8192) = 8192
openat(AT_FDCWD, "base/139580/139675", O_RDWR|O_LARGEFILE) = 66
read(66, "\0\0\0\0\274\264/F\4\214\0\0<\0\360\37\360\37\4 \0\0\0\0b1\5\0\3\0\0\0"..., 8192) = 8192
_llseek(66, 24576, [24576], SEEK_SET) = 0
read(66, "\0\0\0\0d^uF\2\250\0\0000\0\254\37\360\37\4 \0\0\0\0\350\237\20\0\304\237\30\0"..., 8192) = 8192
_llseek(66, 49152, [49152], SEEK_SET) = 0
read(66, "\0\0\0\0t\264/F\247\n\0\0\f\3\24\27\360\37\4 \0\0\0\0\344\237\30\0\330\237\30\0"..., 8192) = 8192
_llseek(35, 114688, [114688], SEEK_SET) = 0
read(35, "\0\0\0\0\204\241\240F\376\212\5\0\230\0\34\17\0 \4 \347\360\1\0\0\0\0\0d\2378\1"..., 8192) = 8192
_llseek(24, 303104, [303104], SEEK_SET) = 0
read(24, "\0\0\0\0\220\213\207F5\241\0\0\\\3\340\22\360\37\4 \0\0\0\0\340\222 \0\340\237 \0"..., 8192) = 8192
_llseek(16, 2834432, [2834432], SEEK_SET) = 0
read(16, "\0\0\0\0\370\226\221F\305\271\5\0\f\1\f\17\0 \4 \371\360\1\0t\237\30\1\350\236\30\1"..., 8192) = 8192
_llseek(33, 352256, [352256], SEEK_SET) = 0
read(33, "\0\0\0\0\320WKC\3462\0\0\200\0D\7\0 \4 \0\0\0\0\360\235\32\0048\235j\1"..., 8192) = 8192
_llseek(34, 65536, [65536], SEEK_SET) = 0
read(34, "\0\0\0\0h\266vFx\34\0\0\220\0\200\31\360\37\4 \0\0\0\0\250\237\220\0t\237h\0"..., 8192) = 8192
_llseek(35, 1064960, [1064960], SEEK_SET) = 0
read(35, "\0\0\0\0\304a\33F\16\340\5\0H\0\360\1\0 \4 \0\0\0\0|\235\4\5\370\232\4\5"..., 8192) = 8192
_llseek(35, 122880, [122880], SEEK_SET) = 0
read(35, "\0\0\0\0p\274/FnR\5\0x\0\220\26\0 \4 \347\360\1\0\5\0\1\0\0\0\0\0"..., 8192) = 8192
_llseek(35, 49152, [49152], SEEK_SET) = 0
read(35, "\0\0\0\0`IrF\236\337\1\0t\0$\33\0 \4 \347\360\1\0\0\0\0\0d\2378\1"..., 8192) = 8192
_llseek(35, 40960, [40960], SEEK_SET) = 0
read(35, "\0\0\0\0\234\304vF\267\306\1\0\310\0\364\7\0 \4 \347\360\1\0|\231\n\1\364\230\n\1"..., 8192) = 8192
_llseek(35, 73728, [73728], SEEK_SET) = 0
read(35, "\0\0\0\0004\215xF\277l\0\0\204\0\200\10\0 \4 \347\360\1\0\0\200\1\0\0\200\1\0"..., 8192) = 8192
_llseek(36, 106496, [106496], SEEK_SET) = 0
read(36, "\0\0\0\0|\n\224F\252V\0\0\\\0\334\34\360\37\4 \0\0\0\0\254\237\210\0|\237`\0"..., 8192) = 8192
_llseek(37, 376832, [376832], SEEK_SET) = 0
read(37, "\0\0\0\0\20\310vFmN\5\0\350\0\304\30\0 \4 \0\0\0\0\20\237\332\1\0\236 \2"..., 8192) = 8192
--- SIGSEGV {si_signo=SIGSEGV, si_code=SEGV_MAPERR, si_addr=0x10} ---
+++ killed by SIGSEGV +++
Karsten Hilbert
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
On Thu, Nov 01, 2018 at 04:11:33PM +0100, Karsten Hilbert wrote:
Will attempt to get a stack trace ...
Eventually, the stack trace (attached).
Thanks for insights,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Attachments:
On 2018-Nov-01, Karsten Hilbert wrote:
Program received signal SIGSEGV, Segmentation fault.
heap_attisnull (tup=0x0, attnum=5, tupleDesc=0xb2990ef4) at ./build/../src/backend/access/common/heaptuple.c:403
403 ./build/../src/backend/access/common/heaptuple.c: Datei oder Verzeichnis nicht gefunden.
(gdb) thread apply all bt fullThread 1 (Thread 0xb4c429c0 (LWP 22367)):
#0 heap_attisnull (tup=0x0, attnum=5, tupleDesc=0xb2990ef4) at ./build/../src/backend/access/common/heaptuple.c:403
__func__ = "heap_attisnull"
#1 0x0087690d in ri_NullCheck (tupDesc=0xb2990ef4, tup=0x0, riinfo=0x2e1d548, rel_is_pk=true) at ./build/../src/backend/utils/adt/ri_triggers.c:2894
attnums = 0x2e1d5a4
i = 0
allnull = true
nonenull = true
#2 0x00879bf7 in RI_FKey_cascade_del (fcinfo=0xbfbda9e4) at ./build/../src/backend/utils/adt/ri_triggers.c:917
Ah, now this is interesting. Can you please supply the definition of
the table? I'm wondering if there is a partitioned table with an FK to
this one. I'm not quite seeing how come 'tup' is NULL there. Can you
'print trigdata' in frame 2?
In general terms, this bug report would have been more actionable if you
had shown the definition of the tables involved right from the start.
--
�lvaro Herrera https://www.2ndQuadrant.com/
PostgreSQL Development, 24x7 Support, Remote DBA, Training & Services
On Thu, Nov 01, 2018 at 12:27:23PM -0300, Alvaro Herrera wrote:
In general terms, this bug report would have been more actionable if you
had shown the definition of the tables involved right from the start.
Sorry for that, will supply.
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
On Thu, Nov 01, 2018 at 12:27:23PM -0300, Alvaro Herrera wrote:
Ah, now this is interesting. Can you please supply the definition of
the table?
Attached.
I'm wondering if there is a partitioned table with an FK to
this one.
There is. Both ref.auto_hint and clin.suppressed_hint are
using inheritance (from audit.audit_fields). However, GNUmed
does not use inheritance for explicit partitioning but rather
similar to how classes and subclasses are used in OO languages.
I'm not quite seeing how come 'tup' is NULL there. Can you
'print trigdata' in frame 2?
Sure, how ? :-)
(I can surely type "print trigdata" but does that already
auto-select from "frame 2" ?)
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Alvaro Herrera <alvherre@2ndquadrant.com> writes:
Ah, now this is interesting. Can you please supply the definition of
the table? I'm wondering if there is a partitioned table with an FK to
this one. I'm not quite seeing how come 'tup' is NULL there.
Yeah, apparently we've passed a null OLD tuple to an RI_FKey_cascade_del
trigger, which surely shouldn't happen. It'd be interesting to look at
the set of triggers on this table. I don't entirely trust psql's \d
to show us reality if there's something screwed up about the triggers,
so in addition to \d output, could we see
select * from pg_trigger where tgrelid = 'ref.auto_hint'::regclass;
regards, tom lane
On Thu, Nov 01, 2018 at 12:27:23PM -0300, Alvaro Herrera wrote:
Program received signal SIGSEGV, Segmentation fault.
heap_attisnull (tup=0x0, attnum=5, tupleDesc=0xb2990ef4) at ./build/../src/backend/access/common/heaptuple.c:403
403 ./build/../src/backend/access/common/heaptuple.c: Datei oder Verzeichnis nicht gefunden.
(gdb) thread apply all bt fullThread 1 (Thread 0xb4c429c0 (LWP 22367)):
#0 heap_attisnull (tup=0x0, attnum=5, tupleDesc=0xb2990ef4) at ./build/../src/backend/access/common/heaptuple.c:403
__func__ = "heap_attisnull"
#1 0x0087690d in ri_NullCheck (tupDesc=0xb2990ef4, tup=0x0, riinfo=0x2e1d548, rel_is_pk=true) at ./build/../src/backend/utils/adt/ri_triggers.c:2894
attnums = 0x2e1d5a4
i = 0
allnull = true
nonenull = true
#2 0x00879bf7 in RI_FKey_cascade_del (fcinfo=0xbfbda9e4) at ./build/../src/backend/utils/adt/ri_triggers.c:917Can you 'print trigdata' in frame 2?
Does this help at all ?
(gdb) frame 2
#2 0x00879bf7 in RI_FKey_cascade_del (fcinfo=0xbfbda9e4) at ./build/../src/backend/utils/adt/ri_triggers.c:917
917 ./build/../src/backend/utils/adt/ri_triggers.c: Datei oder Verzeichnis nicht gefunden.
(gdb) print trigdata
$1 = (TriggerData *) 0xbfbdaca4
It is from another run, however.
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
On Thu, Nov 01, 2018 at 11:43:56AM -0400, Tom Lane wrote:
Alvaro Herrera <alvherre@2ndquadrant.com> writes:
Ah, now this is interesting. Can you please supply the definition of
the table? I'm wondering if there is a partitioned table with an FK to
this one. I'm not quite seeing how come 'tup' is NULL there.Yeah, apparently we've passed a null OLD tuple to an RI_FKey_cascade_del
trigger, which surely shouldn't happen. It'd be interesting to look at
the set of triggers on this table. I don't entirely trust psql's \d
to show us reality if there's something screwed up about the triggers,
so in addition to \d output, could we seeselect * from pg_trigger where tgrelid = 'ref.auto_hint'::regclass;
Ausgabeformat ist �wrapped�.
tgrelid | tgname | tgfoid | tgtype | tgenabled | tgisinternal | tgconstrrelid | tgconstrindid | tgconstraint | tgdeferrable | tginitdeferred | tgnargs | tgattr | tgargs | tgqual | tgoldtable | tgnewtable
---------+-------------------------------+--------+--------+-----------+--------------+---------------+---------------+--------------+--------------+----------------+---------+--------+--------+--------+------------+------------
111088 | RI_ConstraintTrigger_a_116970 | 1646 | 9 | O | t | 116789 | 111099 | 116969 | f | f | 0 | | \x | | |
111088 | RI_ConstraintTrigger_a_116971 | 1649 | 17 | O | t | 116789 | 111099 | 116969 | f | f | 0 | | \x | | |
111088 | zt_ins_auto_hint | 141652 | 7 | O | f | 0 | 0 | 0 | f | f | 0 | | \x | | |
111088 | zt_upd_auto_hint | 141654 | 19 | O | f | 0 | 0 | 0 | f | f | 0 | | \x | | |
111088 | zt_del_auto_hint | 141656 | 11 | O | f | 0 | 0 | 0 | f | f | 0 | | \x | | |
(5 Zeilen)
BTW, do you want me to attach text files or include into the
body (potential wrapping issues on display) ?
Thanks,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Karsten Hilbert <Karsten.Hilbert@gmx.net> writes:
On Thu, Nov 01, 2018 at 11:43:56AM -0400, Tom Lane wrote:
Yeah, apparently we've passed a null OLD tuple to an RI_FKey_cascade_del
trigger, which surely shouldn't happen. It'd be interesting to look at
the set of triggers on this table. I don't entirely trust psql's \d
to show us reality if there's something screwed up about the triggers,
so in addition to \d output, could we see
select * from pg_trigger where tgrelid = 'ref.auto_hint'::regclass;
[ pretty normal-looking trigger entries ]
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this. If the particular
tuple you're trying to delete predates the last ALTER TABLE ADD COLUMN
operation on the table, then this bug would result in t_self getting
set to "invalid", which'd cause AfterTriggerSaveEvent to save "ate_ctid1"
as "invalid", which'd lead to a null tuple getting passed when the trigger
eventually gets invoked.
regards, tom lane
On Fri, Nov 02, 2018 at 11:56:58PM -0400, Tom Lane wrote:
On Thu, Nov 01, 2018 at 11:43:56AM -0400, Tom Lane wrote:
Yeah, apparently we've passed a null OLD tuple to an RI_FKey_cascade_del
trigger, which surely shouldn't happen. It'd be interesting to look at
the set of triggers on this table. I don't entirely trust psql's \d
to show us reality if there's something screwed up about the triggers,
so in addition to \d output, could we see
select * from pg_trigger where tgrelid = 'ref.auto_hint'::regclass;[ pretty normal-looking trigger entries ]
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this. If the particular
tuple you're trying to delete predates the last ALTER TABLE ADD COLUMN
operation on the table, then this bug would result in t_self getting
set to "invalid", which'd cause AfterTriggerSaveEvent to save "ate_ctid1"
as "invalid", which'd lead to a null tuple getting passed when the trigger
eventually gets invoked.
Now, that is a theory I can follow up on -- all the
bootstrapping SQL scripts are under version control so I can
pin down the exact sequence of events.
... goes off to do some checks ...
And sure enough there's an ALTER TABLE ADD COLUMN related to
that table:
alter table ref.auto_hint
add column recommendation_query text;
-- (audit log table needs to get the new column, too)
alter table audit.log_auto_hint
add column recommendation_query text;
before the DELETE of the pre-existing tuple.
When running a rigged upgrade that stops right before those
ALTER TABLEs and then doing the following:
begin;
-- instrument:
insert into ref.auto_hint (title, query, hint, source, lang) values (
'DELETE test',
'select 1;',
'insertion before ADD COLUMN',
'testing',
'en'
);
-- works:
DELETE from ref.auto_hint where title = 'DELETE test';
-- instrument, again:
insert into ref.auto_hint (title, query, hint, source, lang) values (
'DELETE test',
'select 1;',
'insertion before ADD COLUMN',
'testing',
'en'
);
alter table ref.auto_hint
add column recommendation_query text;
-- audit log table needs to get the message
alter table audit.log_auto_hint
add column recommendation_query text;
-- fails:
DELETE from ref.auto_hint where title = 'DELETE test';
rollback;
the expected segfault does indeed occur.
Conversely, moving the offending
DELETE FROM ref.auto_hint WHERE title = 'Kontraindikation: ACE/Sartan <-> Schwangerschaft';
to right before the ALTER TABLEs makes the full upgrade run
through without further problems.
Looking at 040a1df61/372102b81 feels like it fits the bill.
So, I guess I can work around the issue by the above
manoeuvre and report back once 040a1df61/372102b81 is
released.
Anything else you'd want me to look into ?
Many thanks,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Karsten Hilbert <Karsten.Hilbert@gmx.net> writes:
On Fri, Nov 02, 2018 at 11:56:58PM -0400, Tom Lane wrote:
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this.
So, I guess I can work around the issue by the above
manoeuvre and report back once 040a1df61/372102b81 is
released.
Anything else you'd want me to look into ?
Don't suppose you'd want to build a server with 372102b81 applied
and see if it works?
regards, tom lane
On Sat, Nov 03, 2018 at 11:39:49AM -0400, Tom Lane wrote:
Karsten Hilbert <Karsten.Hilbert@gmx.net> writes:
On Fri, Nov 02, 2018 at 11:56:58PM -0400, Tom Lane wrote:
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this.So, I guess I can work around the issue by the above
manoeuvre and report back once 040a1df61/372102b81 is
released.
Anything else you'd want me to look into ?Don't suppose you'd want to build a server with 372102b81 applied
and see if it works?
Yeah, I feared that answer ;-)
However, I lack the skills and the machine(s) to do so ...
I will, at any rate, report back when the existing fix is released.
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B
Hello,
we reached the exactly same problem after upgrading to PostgreSQL 11 - the
server crashed on a DELETE statement with a trigger. We also observed an
AFTER DELETE trigger receiving NULL values in OLD. Now I see the problem
seems to be solved (theoretically). Unfortunately, we are not able to build
the server with the patch, so we cannot confirm that. However, when we just
copied the database (within the same server), the same DELETE executed on
the copy with no problems.
I would like to ask, however: could the same problem arise from an UPDATE
statement (also on a table with an AFTER trigger), or would that be another
bug (technical details below)?
As the bug causes our production servers segfault several times a day, we'd
like to solve the problem as soon as possible. Do I understand it correctly
that if we dump and restore the database, the bug should not occur (until
the next ALTER TABLE ADD COLUMN - which we'll avoid until the patch is
released)?
With the update, we caught this (we also have the core dump and could
provide it privately if useful):
#0 __memcmp_sse4_1 () at ../sysdeps/x86_64/multiarch/memcmp-sse4.S:793
No locals.
#1 0x00007f6a6b993296 in datumIsEqual (value1=7, value2=7, typByVal=<
optimized out>, typLen=16) at /build/postgresql-11-oDwOcQ/postgresql-11-
11.0/build/../src/backend/utils/adt/datum.c:249
size1 = 16
size2 = <optimized out>
s1 = 0x7 <error: Cannot access memory at address 0x7>
s2 = 0x7 <error: Cannot access memory at address 0x7>
res = <optimized out>
#2 0x00007f6a6b6b89de in ProjIndexIsUnchanged (newtup=0x7f6a6d504e80,
oldtup=0x7ffc9c1c1270, relation=0x7f6a6b4c1738) at /build/postgresql-11-
oDwOcQ/postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4539
att = <optimized out>
indexOid = <optimized out>
indexDesc = 0x7f6a6b4c5008
indexInfo = 0x7f6a6d505ca8
i = 0
indexoidlist = <optimized out>
econtext = 0x7f6a6d4c5080
new_isnull = {false, false, false, 156, 252, 127, false, false, 44,
29, 128, 107, 106, 127, false, false, 116, 54, 76, 107, 106, 127, false,
false, 123, false, false, false, false, false, false, false}
slot = 0x7f6a6d507b78
equals = true
old_isnull = {false, false, false, 109, 106, 127, false, false, 165,
199, 80, 109, 106, 127, false, false, 160, 199, 80, 109, 106, 127, false,
false, 168, 199, 80, 109, 106, 127, false, false}
new_values = {7, 4, 140095077240522, 16, 140722927572064,
140095077271456, 140095077272720, 140722927572079, 0, 0, 140722927572048,
140095054460096, 140095077060032, 140095077242520, 5, 4, 140722927572096,
140095046814123,
140722927572096, 140095046825162, 140095043410520,
140095077060880, 140722927572224, 140095046865098, 60129542543, 23274985272,
140095043410520, 140095077060032, 140095043409720, 140095077060304,
140095077237568,
140095043414504}
indexno = 1
l = 0x7f6a6d50d180
estate = 0x7f6a6d4c4e70
old_values = {7, 5, 140078657614882, 1, 140095077060032, 1024,
140095077271456, 0, 140722927571760, 140095049517261, 140722927571808,
140722927571776, 140722927571792, 140095046814329, 18, 140095077271464,
140095076986224,
140095077237568, 22, 100, 140722927571856, 140722927571920,
140095046831813, 140722927571856, 140095046842624, 0, 140095077265656, 3,
140095077271456, 140095077271792, 140095077271456, 140095077242520}
#3 heap_update (relation=relation@entry=0x7f6a6b4c1738, otid=otid@entry=0x7
ffc9c1c1690, newtup=newtup@entry=0x7f6a6d504e80, cid=0, crosscheck=<
optimized out>, wait=wait@entry=true, hufd=hufd@entry=0x7ffc9c1c15b0,
lockmode=lockmode@entry=0x7ffc9c1c15a4) at /build/postgresql-11-oDwOcQ/
postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4230
result = <optimized out>
xid = 245028971
hot_attrs = 0x7f6a6d50d0a0
proj_idx_attrs = 0x7f6a6d50d0b8
key_attrs = 0x7f6a6d50d0d0
id_attrs = 0x7f6a6d50d0e8
interesting_attrs = 0x7f6a6d50d100
lp = <optimized out>
oldtup = {t_len = 81, t_self = {ip_blkid = {bi_hi = 0, bi_lo = 9},
ip_posid = 71}, t_tableOid = 65471913, t_data = 0x7f669aa0b3f0}
heaptup = 0x7f6a6d504e80
old_key_tuple = 0x0
old_key_copied = false
page = 0x7f669aa0b180 "=="
block = <optimized out>
mxact_status = <optimized out>
buffer = <optimized out>
newbuf = 17858
vmbuffer = 0
vmbuffer_new = 0
need_toast = <optimized out>
newtupsize = <optimized out>
pagefree = <optimized out>
have_tuple_lock = false
iscombo = false
use_hot_update = false
hot_attrs_checked = <optimized out>
key_intact = <optimized out>
all_visible_cleared = false
all_visible_cleared_new = false
checked_lockers = <optimized out>
locker_remains = <optimized out>
xmax_new_tuple = <optimized out>
xmax_old_tuple = 245028971
infomask_old_tuple = 0
infomask2_old_tuple = 8192
infomask_new_tuple = 144
infomask2_new_tuple = 0
__func__ = "heap_update"
#4 0x00007f6a6b82f2c9 in ExecUpdate (mtstate=mtstate@entry=0x7f6a6d4da3f0,
tupleid=0x7ffc9c1c1690, oldtuple=0x0, slot=0x7f6a6d504340, planSlot=
planSlot@entry=0x7f6a6d5685e8, epqstate=epqstate@entry=0x7f6a6d4da4b0,
estate=estate@entry=0x7f6a6d4d8ed0, canSetTag=true) at /build/postgresql
-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/nodeModifyTable.
c:1209
lockmode = LockTupleNoKeyExclusive
partition_constraint_failed = false
tuple = 0x7f6a6d504e80
resultRelInfo = 0x7f6a6d4d9110
resultRelationDesc = 0x7f6a6b4c1738
result = <optimized out>
hufd = {ctid = {ip_blkid = {bi_hi = 5616, bi_lo = 39964}, ip_posid =
32764}, xmax = 1803594893, cmax = 32618}
recheckIndexes = 0x0
saved_tcs_map = 0x0
__func__ = "ExecUpdate"
#5 0x00007f6a6b82f978 in ExecModifyTable (pstate=0x7f6a6d4da3f0) at /build/
postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/
nodeModifyTable.c:2166
node = 0x7f6a6d4da3f0
proute = 0x0
estate = 0x7f6a6d4d8ed0
operation = CMD_UPDATE
saved_resultRelInfo = 0x0
resultRelInfo = 0x7f6a6d4d9110
subplanstate = 0x7f6a6d5679f8
junkfilter = 0x7f6a6d504218
slot = <optimized out>
tupleid = <optimized out>
tuple_ctid = {ip_blkid = {bi_hi = 0, bi_lo = 9}, ip_posid = 71}
oldtupdata = {t_len = 2619086544, t_self = {ip_blkid = {bi_hi =
32764, bi_lo = 0}, ip_posid = 9204}, t_tableOid = 32618, t_data = 0x7ffc9c1c
16d0}
oldtuple = <optimized out>
__func__ = "ExecModifyTable"
#6 0x00007f6a6b80b25b in ExecProcNode (node=0x7f6a6d4da3f0) at /build/
postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/include/executor/
executor.h:237
No locals.
#7 ExecutePlan (execute_once=<optimized out>, dest=0x7f6a6d5ed298,
direction=<optimized out>, numberTuples=0, sendTuples=false, operation=CMD_
UPDATE, use_parallel_mode=<optimized out>, planstate=0x7f6a6d4da3f0, estate=
0x7f6a6d4d8ed0)
at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/
executor/execMain.c:1723
slot = <optimized out>
current_tuple_count = 0
#8 standard_ExecutorRun (queryDesc=0x7f6a6d5f5b80, direction=<optimized out
, count=0, execute_once=<optimized out>) at /build/postgresql-11-oDwOcQ/
postgresql-11-11.0/build/../src/backend/executor/execMain.c:364
estate = 0x7f6a6d4d8ed0
operation = CMD_UPDATE
dest = 0x7f6a6d5ed298
sendTuples = <optimized out>
__func__ = "standard_ExecutorRun"
#9 0x00007f6a6b95b41d in ProcessQuery (plan=<optimized out>,
sourceText=0x7f6a6d3b45a0 "UPDATE public.schedulecard SET ext_ident=
NULL, finalreport_absence_cnt=NULL, period_day=4, period_num=1, rotates=
false, rotationgroup_id=NULL, schedulecard_id=NULL, schedulecardblock_id=
NULL, schedule"...,
params=0x0, queryEnv=0x0, dest=0x7f6a6d5ed298, completionTag=0x7ffc9c1c
19d0 "") at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/
backend/tcop/pquery.c:161
queryDesc = 0x7f6a6d5f5b80
#10 0x00007f6a6b95b668 in PortalRunMulti (portal=portal@entry=0x7f6a6d47f
230, isTopLevel=isTopLevel@entry=true, setHoldSnapshot=setHoldSnapshot@entry
=false, dest=dest@entry=0x7f6a6d5ed298, altdest=altdest@entry=0x7f6a6d5ed
298,
completionTag=completionTag@entry=0x7ffc9c1c19d0 "") at /build/
postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:
1286
pstmt = 0x7f6a6d5ed138
active_snapshot_set = true
stmtlist_item = 0x7f6a6d5ed248
#11 0x00007f6a6b95c2d5 in PortalRun (portal=portal@entry=0x7f6a6d47f230,
count=count@entry=9223372036854775807, isTopLevel=isTopLevel@entry=true, run
_once=run_once@entry=true, dest=dest@entry=0x7f6a6d5ed298,
altdest=altdest@entry=0x7f6a6d5ed298, completionTag=completionTag@entry=
0x7ffc9c1c19d0 "") at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/
build/../src/backend/tcop/pquery.c:799
save_exception_stack = 0x7ffc9c1c1c00
save_context_stack = 0x0
local_sigjmp_buf = {{__jmpbuf = {140722927574016,
7153736072036697610, 140095075869696, 140722927573456, 140095076692528,
140095075869744, 7153736071992657418, 7091693995611473418}, __mask_was_saved
= 0, __saved_mask = {__val = {
0, 140723125634669, 0, 140095051070678, 64, 112,
140095075869696, 140095075861648, 140095078191720, 140722927573328,
140095049517496, 140722927573360, 2, 140095075869696, 2, 140722927573360}}}}
result = <optimized out>
nprocessed = <optimized out>
saveTopTransactionResourceOwner = 0x7f6a6d4182c8
saveTopTransactionContext = 0x7f6a6d490150
saveActivePortal = 0x0
saveResourceOwner = 0x7f6a6d4182c8
savePortalContext = 0x0
saveMemoryContext = 0x7f6a6d490150
__func__ = "PortalRun"
#12 0x00007f6a6b957f7f in exec_simple_query (
query_string=0x7f6a6d3b45a0 "UPDATE public.schedulecard SET ext_ident=
NULL, finalreport_absence_cnt=NULL, period_day=4, period_num=1, rotates=
false, rotationgroup_id=NULL, schedulecard_id=NULL, schedulecardblock_id=
NULL, schedule"...) at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/
build/../src/backend/tcop/postgres.c:1122
parsetree = 0x7f6a6d3b6400
portal = 0x7f6a6d47f230
snapshot_set = <optimized out>
commandTag = <optimized out>
completionTag = "\000\032\034\234\374\177\000\000\341\356\247kj\177\
000\000\000\000\000\000\000\000\000\000\060\316\367kj\177\000\000\340&\360
kj\177\000\000\234U\357kj\177\000\000\240E;mj\177\000\000Q\000\000\000\000\
000\000"
querytree_list = <optimized out>
plantree_list = <optimized out>
receiver = 0x7f6a6d5ed298
format = 0
dest = DestRemote
parsetree_list = 0x7f6a6d3b6450
parsetree_item = 0x7f6a6d3b6430
save_log_statement_stats = false
was_logged = false
use_implicit_block = false
msec_str = "\000\032\034\234\374\177\000\000\341\356\247kj\177\000\
000\000\000\000\000\000\000\000\000\060\316\367kj\177\000"
__func__ = "exec_simple_query"
#13 0x00007f6a6b95930a in PostgresMain (argc=<optimized out>, argv=argv@
entry=0x7f6a6d400220, dbname=0x7f6a6d4001b0 "mydb", username=<optimized out>
)
at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/
tcop/postgres.c:4159
query_string = 0x7f6a6d3b45a0 "UPDATE public.schedulecard SET ext_
ident=NULL, finalreport_absence_cnt=NULL, period_day=4, period_num=1,
rotates=false, rotationgroup_id=NULL, schedulecard_id=NULL,
schedulecardblock_id=NULL, schedule"...
firstchar = 81
input_message = {
data = 0x7f6a6d3b45a0 "UPDATE public.schedulecard SET ext_ident=
NULL, finalreport_absence_cnt=NULL, period_day=4, period_num=1, rotates=
false, rotationgroup_id=NULL, schedulecard_id=NULL, schedulecardblock_id=
NULL, schedule"..., len = 319, maxlen = 1024, cursor = 319}
local_sigjmp_buf = {{__jmpbuf = {140095054460088,
7153736071902479882, 140095054460096, 1, 0, 140095076133088,
7153736071933937162, 7091693993451144714}, __mask_was_saved = 1, __saved_
mask = {__val = {0, 140095076133088,
140095004765576, 844424930131970, 206158430256,
140722927574360, 140722927574144, 293, 140095076133088, 0, 0,
140095075861648, 1024, 140722927574468, 0, 140722927574240}}}}
send_ready_for_query = false
disable_idle_in_transaction_timeout = false
__func__ = "PostgresMain"
#14 0x00007f6a6b67867d in BackendRun (port=0x7f6a6d3f68e0) at /build/
postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/
postmaster.c:4361
ac = 1
secs = 594476990
usecs = 933865
i = 1
av = 0x7f6a6d400220
maxac = <optimized out>
#15 BackendStartup (port=0x7f6a6d3f68e0) at /build/postgresql-11-oDwOcQ/
postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:4033
bn = <optimized out>
pid = <optimized out>
#16 ServerLoop () at /build/postgresql-11-oDwOcQ/postgresql-11-11.0/
build/../src/backend/postmaster/postmaster.c:1706
rmask = {fds_bits = {8, 0 <repeats 15 times>}}
selres = <optimized out>
now = <optimized out>
readmask = {fds_bits = {200, 0 <repeats 15 times>}}
last_lockfile_recheck_time = 1541161751
last_touch_time = 1541161147
__func__ = "ServerLoop"
#17 0x00007f6a6b8e7644 in PostmasterMain (argc=5, argv=<optimized out>) at /
build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/
postmaster/postmaster.c:1379
opt = <optimized out>
status = <optimized out>
userDoption = <optimized out>
listen_addr_saved = true
i = <optimized out>
output_config_variable = <optimized out>
__func__ = "PostmasterMain"
#18 0x00007f6a6b679616 in main (argc=5, argv=0x7f6a6d3af1f0) at /build/
postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/main/main.c:228
No locals.
Best regards,
Ondřej Bouda
---------- Původní e-mail ----------
Od: Tom Lane <tgl@sss.pgh.pa.us>
Komu: Karsten Hilbert <Karsten.Hilbert@gmx.net>
Datum: 3. 11. 2018 4:57:19
Předmět: Re: backend crash on DELETE, reproducible locally
"Karsten Hilbert <Karsten.Hilbert@gmx.net> writes:
On Thu, Nov 01, 2018 at 11:43:56AM -0400, Tom Lane wrote:
Yeah, apparently we've passed a null OLD tuple to an RI_FKey_cascade_del
trigger, which surely shouldn't happen. It'd be interesting to look at
the set of triggers on this table. I don't entirely trust psql's \d
to show us reality if there's something screwed up about the triggers,
so in addition to \d output, could we see
select * from pg_trigger where tgrelid = 'ref.auto_hint'::regclass;
[ pretty normal-looking trigger entries ]
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this. If the particular
tuple you're trying to delete predates the last ALTER TABLE ADD COLUMN
operation on the table, then this bug would result in t_self getting
set to "invalid", which'd cause AfterTriggerSaveEvent to save "ate_ctid1"
as "invalid", which'd lead to a null tuple getting passed when the trigger
eventually gets invoked.
regards, tom lane
"
<obouda@email.cz> writes:
we reached the exactly same problem after upgrading to PostgreSQL 11 - the
server crashed on a DELETE statement with a trigger. We also observed an
AFTER DELETE trigger receiving NULL values in OLD. Now I see the problem
seems to be solved (theoretically). Unfortunately, we are not able to build
the server with the patch, so we cannot confirm that. However, when we just
copied the database (within the same server), the same DELETE executed on
the copy with no problems.
Yeah, dump/reload would make the problem go away.
I would like to ask, however: could the same problem arise from an UPDATE
statement (also on a table with an AFTER trigger), or would that be another
bug (technical details below)?
Same bug.
regards, tom lane
On 11/03/2018 02:19 PM, obouda@email.cz wrote:
Hello,
we reached the exactly same problem after upgrading to PostgreSQL 11 - the
server crashed on a DELETE statement with a trigger.We also observed an
AFTER DELETE trigger receiving NULL values in OLD. Now I see the problem
seems to be solved (theoretically). Unfortunately, we are not able to
build the server with the patch, so we cannot confirm that. However, when
we just copied the database (within the same server), the same DELETE
executed on the copy with no problems.I would like to ask, however: could the same problemarise from an UPDATE
statement (also on a table with an AFTER trigger), or would that be
another bug (technical details below)?
As the bug causes our production servers segfault several times a day,
we'd like to solve the problem as soon as possible. Do I understand it
correctly that if we dump and restore the database, the bug should not
occur (until the next ALTER TABLE ADD COLUMN - which we'll avoid until the
patch is released)?
You can dump that single table, truncate the table (presuming no FKs) and
then restore it.
--
Angular momentum makes the world go 'round.
Dne 3.11.2018 v 20:38 Tom Lane napsal(a):
Yeah, dump/reload would make the problem go away.
Same bug.
So we dumped and restored all our databases. After that, the crash on
DELETE never occurred (before, it was several times a day). However, the
crash on UPDATE still occurs on specific rows. We are quite certain no
ALTER TABLE statement was executed on the table after the restore.
There are two AFTER INSERT OR UPDATE constraint triggers and one BEFORE
INSERT OR UPDATE trigger on the table, all of which are implemented in
plpgsql. Multiple physical servers, on separate databases with identical
schema, crash on the same type of UPDATE query (different just in
concrete values to be updated). The same code worked perfectly on 10.x.
See the attached backtrace below. Can we do something else to catch the
bug? Or can we hope for this bug to be already fixed and released in the
upcoming version?
Regards,
Ondřej Bouda
[New LWP 8307]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
Core was generated by `postgres: 11/main: usr mydb 127.0.0.1(56829)
UPDATE '.
Program terminated with signal SIGSEGV, Segmentation fault.
#0 __memcmp_sse4_1 () at ../sysdeps/x86_64/multiarch/memcmp-sse4.S:793
#0 __memcmp_sse4_1 () at ../sysdeps/x86_64/multiarch/memcmp-sse4.S:793
No locals.
#1 0x00007f6a6b993296 in datumIsEqual (value1=12, value2=12,
typByVal=<optimized out>, typLen=16) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/utils/adt/datum.c:249
size1 = 16
size2 = <optimized out>
s1 = 0xc <error: Cannot access memory at address 0xc>
s2 = 0xc <error: Cannot access memory at address 0xc>
res = <optimized out>
#2 0x00007f6a6b6b89de in ProjIndexIsUnchanged (newtup=0x7f6a6d5ccdd0,
oldtup=0x7ffc9c1c1270, relation=0x7f6a6b4c3680) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4539
att = <optimized out>
indexOid = <optimized out>
indexDesc = 0x7f6a6b4c7cf0
indexInfo = 0x7f6a6d5cdbf8
i = 0
indexoidlist = <optimized out>
econtext = 0x7f6a6d4c2c10
new_isnull = {false, false, false, 156, 252, 127, false, false,
44, 29, 128, 107, 106, 127, false, false, 203, 89, 76, 107, 106, 127,
false, false, 123, false, false, false, false, false, false, false}
slot = 0x7f6a6d5cf8b8
equals = true
old_isnull = {false, false, false, 109, 106, 127, false, false,
69, 46, 80, 109, 106, 127, false, false, 64, 46, 80, 109, 106, 127,
false, false, 72, 46, 80, 109, 106, 127, false, false}
new_values = {12, 2, 140095078059546, 16, 140722927572064,
140095077232192, 140095077233456, 140722927572079, 0, 0,
140722927572048, 140095054460096, 140095077050704, 140095078061816, 5,
4, 140722927572096, 140095046814123, 140722927572096, 140095046825162,
140095043418528, 140095077051552, 140722927572224, 140095046865098,
60129542543, 23274993280, 140095043418528, 140095077050704,
140095043417728, 140095077050976, 140095078056288, 140095043422512}
indexno = 2
l = 0x7f6a6d503840
estate = 0x7f6a6d4c2a00
old_values = {12, 1, 140078631611970, 1, 140095077050704, 1024,
140095077232192, 0, 140722927571760, 140095049517261, 140722927571808,
140722927571776, 140722927571792, 140095046814329, 18, 140095077232200,
140095076976896, 140095078056288, 22, 100, 140722927571856,
140722927571920, 140095046831813, 140722927571856, 140095046842624, 0,
140095077226392, 3, 140095077232192, 140095077232528, 140095077232192,
140095078061816}
#3 heap_update (relation=relation@entry=0x7f6a6b4c3680,
otid=otid@entry=0x7ffc9c1c1690, newtup=newtup@entry=0x7f6a6d5ccdd0,
cid=0, crosscheck=<optimized out>, wait=wait@entry=true,
hufd=hufd@entry=0x7ffc9c1c15b0, lockmode=lockmode@entry=0x7ffc9c1c15a4)
at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4230
result = <optimized out>
xid = 245762845
hot_attrs = 0x7f6a6d503740
proj_idx_attrs = 0x7f6a6d503758
key_attrs = 0x7f6a6d503770
id_attrs = 0x7f6a6d503788
interesting_attrs = 0x7f6a6d5037a0
lp = <optimized out>
oldtup = {t_len = 85, t_self = {ip_blkid = {bi_hi = 0, bi_lo =
45}, ip_posid = 10}, t_tableOid = 557732818, t_data = 0x7f669913ee10}
heaptup = 0x7f6a6d5ccdd0
old_key_tuple = 0x0
old_key_copied = false
page = 0x7f669913d180 "]="
block = <optimized out>
mxact_status = <optimized out>
buffer = <optimized out>
newbuf = 14683
vmbuffer = 0
vmbuffer_new = 0
need_toast = <optimized out>
newtupsize = <optimized out>
pagefree = <optimized out>
have_tuple_lock = false
iscombo = false
use_hot_update = false
hot_attrs_checked = <optimized out>
key_intact = <optimized out>
all_visible_cleared = false
all_visible_cleared_new = false
checked_lockers = <optimized out>
locker_remains = <optimized out>
xmax_new_tuple = <optimized out>
xmax_old_tuple = 245762845
infomask_old_tuple = 0
infomask2_old_tuple = 8192
infomask_new_tuple = 144
infomask2_new_tuple = 0
__func__ = "heap_update"
#4 0x00007f6a6b82f2c9 in ExecUpdate
(mtstate=mtstate@entry=0x7f6a6d4d81c0, tupleid=0x7ffc9c1c1690,
oldtuple=0x0, slot=0x7f6a6d5cc160,
planSlot=planSlot@entry=0x7f6a6d567578,
epqstate=epqstate@entry=0x7f6a6d4d8280,
estate=estate@entry=0x7f6a6d4d6a60, canSetTag=true) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/nodeModifyTable.c:1209
lockmode = LockTupleNoKeyExclusive
partition_constraint_failed = false
tuple = 0x7f6a6d5ccdd0
resultRelInfo = 0x7f6a6d4d6ca0
resultRelationDesc = 0x7f6a6b4c3680
result = <optimized out>
hufd = {ctid = {ip_blkid = {bi_hi = 5616, bi_lo = 39964},
ip_posid = 32764}, xmax = 1803594893, cmax = 32618}
recheckIndexes = 0x0
saved_tcs_map = 0x0
__func__ = "ExecUpdate"
#5 0x00007f6a6b82f978 in ExecModifyTable (pstate=0x7f6a6d4d81c0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/nodeModifyTable.c:2166
node = 0x7f6a6d4d81c0
proute = 0x0
estate = 0x7f6a6d4d6a60
operation = CMD_UPDATE
saved_resultRelInfo = 0x0
resultRelInfo = 0x7f6a6d4d6ca0
subplanstate = 0x7f6a6d566988
junkfilter = 0x7f6a6d5cc038
slot = <optimized out>
tupleid = <optimized out>
tuple_ctid = {ip_blkid = {bi_hi = 0, bi_lo = 45}, ip_posid = 10}
oldtupdata = {t_len = 2619086544, t_self = {ip_blkid = {bi_hi =
32764, bi_lo = 0}, ip_posid = 9204}, t_tableOid = 32618, t_data =
0x7ffc9c1c16d0}
oldtuple = <optimized out>
__func__ = "ExecModifyTable"
#6 0x00007f6a6b80b25b in ExecProcNode (node=0x7f6a6d4d81c0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/include/executor/executor.h:237
No locals.
#7 ExecutePlan (execute_once=<optimized out>, dest=0x7f6a6d5e9448,
direction=<optimized out>, numberTuples=0, sendTuples=false,
operation=CMD_UPDATE, use_parallel_mode=<optimized out>,
planstate=0x7f6a6d4d81c0, estate=0x7f6a6d4d6a60) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/execMain.c:1723
slot = <optimized out>
current_tuple_count = 0
#8 standard_ExecutorRun (queryDesc=0x7f6a6d566040, direction=<optimized
out>, count=0, execute_once=<optimized out>) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/execMain.c:364
estate = 0x7f6a6d4d6a60
operation = CMD_UPDATE
dest = 0x7f6a6d5e9448
sendTuples = <optimized out>
__func__ = "standard_ExecutorRun"
#9 0x00007f6a6b95b41d in ProcessQuery (plan=<optimized out>,
sourceText=0x7f6a6d3b45a0 "UPDATE public.schedulecard SET
ext_ident=NULL, finalreport_absence_cnt=NULL, period_day=2,
period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"...,
params=0x0, queryEnv=0x0, dest=0x7f6a6d5e9448,
completionTag=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:161
queryDesc = 0x7f6a6d566040
#10 0x00007f6a6b95b668 in PortalRunMulti
(portal=portal@entry=0x7f6a6d479d00, isTopLevel=isTopLevel@entry=true,
setHoldSnapshot=setHoldSnapshot@entry=false,
dest=dest@entry=0x7f6a6d5e9448, altdest=altdest@entry=0x7f6a6d5e9448,
completionTag=completionTag@entry=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:1286
pstmt = 0x7f6a6d5e92e8
active_snapshot_set = true
stmtlist_item = 0x7f6a6d5e93f8
#11 0x00007f6a6b95c2d5 in PortalRun (portal=portal@entry=0x7f6a6d479d00,
count=count@entry=9223372036854775807, isTopLevel=isTopLevel@entry=true,
run_once=run_once@entry=true, dest=dest@entry=0x7f6a6d5e9448,
altdest=altdest@entry=0x7f6a6d5e9448,
completionTag=completionTag@entry=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:799
save_exception_stack = 0x7ffc9c1c1c00
save_context_stack = 0x0
local_sigjmp_buf = {{__jmpbuf = {140722927574016,
7153736072036697610, 140095075869728, 140722927573456, 140095076670720,
140095075869776, 7153736071992657418, 7091693995611473418},
__mask_was_saved = 0, __saved_mask = {__val = {0, 140723125634669, 0,
140095051070678, 64, 112, 140095075869728, 140095075861648,
140095078175768, 140722927573328, 140095049517496, 140722927573360, 2,
140095075869728, 2, 140722927573360}}}}
result = <optimized out>
nprocessed = <optimized out>
saveTopTransactionResourceOwner = 0x7f6a6d41b148
saveTopTransactionContext = 0x7f6a6d48d8d0
saveActivePortal = 0x0
saveResourceOwner = 0x7f6a6d41b148
savePortalContext = 0x0
saveMemoryContext = 0x7f6a6d48d8d0
__func__ = "PortalRun"
#12 0x00007f6a6b957f7f in exec_simple_query (query_string=0x7f6a6d3b45a0
"UPDATE public.schedulecard SET ext_ident=NULL,
finalreport_absence_cnt=NULL, period_day=2, period_num=1, rotates=false,
rotationgroup_id=NULL, schedulecard_id=NULL, schedulecardblock_id=NULL,
schedule"...) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/postgres.c:1122
parsetree = 0x7f6a6d3b6420
portal = 0x7f6a6d479d00
snapshot_set = <optimized out>
commandTag = <optimized out>
completionTag =
"\000\032\034\234\374\177\000\000\341\356\247kj\177\000\000\000\000\000\000\000\000\000\000\060\316\367kj\177\000\000\340&\360kj\177\000\000\234U\357kj\177\000\000\240E;mj\177\000\000Q\000\000\000\000\000\000"
querytree_list = <optimized out>
plantree_list = <optimized out>
receiver = 0x7f6a6d5e9448
format = 0
dest = DestRemote
parsetree_list = 0x7f6a6d3b6470
parsetree_item = 0x7f6a6d3b6450
save_log_statement_stats = false
was_logged = false
use_implicit_block = false
msec_str =
"\000\032\034\234\374\177\000\000\341\356\247kj\177\000\000\000\000\000\000\000\000\000\000\060\316\367kj\177\000"
__func__ = "exec_simple_query"
#13 0x00007f6a6b95930a in PostgresMain (argc=<optimized out>,
argv=argv@entry=0x7f6a6d400400, dbname=0x7f6a6d4003e0 "mydb",
username=<optimized out>) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/postgres.c:4159
query_string = 0x7f6a6d3b45a0 "UPDATE public.schedulecard SET
ext_ident=NULL, finalreport_absence_cnt=NULL, period_day=2,
period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"...
firstchar = 81
input_message = {data = 0x7f6a6d3b45a0 "UPDATE
public.schedulecard SET ext_ident=NULL, finalreport_absence_cnt=NULL,
period_day=2, period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"..., len =
328, maxlen = 1024, cursor = 328}
local_sigjmp_buf = {{__jmpbuf = {140095054460088,
7153736071902479882, 140095054460096, 1, 0, 140095076143920,
7153736071933937162, 7091693993451144714}, __mask_was_saved = 1,
__saved_mask = {__val = {0, 140095076143920, 140095004765576,
844424930131970, 206158430256, 140722927574360, 140722927574144, 293,
140095076143920, 0, 0, 140095075861648, 1024, 140722927574468, 0,
140722927574240}}}}
send_ready_for_query = false
disable_idle_in_transaction_timeout = false
__func__ = "PostgresMain"
#14 0x00007f6a6b67867d in BackendRun (port=0x7f6a6d3f9330) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:4361
ac = 1
secs = 594683937
usecs = 521905
i = 1
av = 0x7f6a6d400400
maxac = <optimized out>
#15 BackendStartup (port=0x7f6a6d3f9330) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:4033
bn = <optimized out>
pid = <optimized out>
#16 ServerLoop () at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:1706
rmask = {fds_bits = {8, 0 <repeats 15 times>}}
selres = <optimized out>
now = <optimized out>
readmask = {fds_bits = {200, 0 <repeats 15 times>}}
last_lockfile_recheck_time = 1541368681
last_touch_time = 1541366480
__func__ = "ServerLoop"
#17 0x00007f6a6b8e7644 in PostmasterMain (argc=5, argv=<optimized out>)
at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:1379
opt = <optimized out>
status = <optimized out>
userDoption = <optimized out>
listen_addr_saved = true
i = <optimized out>
output_config_variable = <optimized out>
__func__ = "PostmasterMain"
#18 0x00007f6a6b679616 in main (argc=5, argv=0x7f6a6d3af1f0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/main/main.c:228
No locals.
Dne 3.11.2018 v 20:38 Tom Lane napsal(a):
Show quoted text
<obouda@email.cz> writes:
we reached the exactly same problem after upgrading to PostgreSQL 11 - the
server crashed on a DELETE statement with a trigger. We also observed an
AFTER DELETE trigger receiving NULL values in OLD. Now I see the problem
seems to be solved (theoretically). Unfortunately, we are not able to build
the server with the patch, so we cannot confirm that. However, when we just
copied the database (within the same server), the same DELETE executed on
the copy with no problems.Yeah, dump/reload would make the problem go away.
I would like to ask, however: could the same problem arise from an UPDATE
statement (also on a table with an AFTER trigger), or would that be another
bug (technical details below)?Same bug.
regards, tom lane
On 2018-Nov-06, Ondřej Bouda wrote:
So we dumped and restored all our databases. After that, the crash on DELETE
never occurred (before, it was several times a day). However, the crash on
UPDATE still occurs on specific rows. We are quite certain no ALTER TABLE
statement was executed on the table after the restore.
There are two AFTER INSERT OR UPDATE constraint triggers and one BEFORE
INSERT OR UPDATE trigger on the table, all of which are implemented in
plpgsql. Multiple physical servers, on separate databases with identical
schema, crash on the same type of UPDATE query (different just in concrete
values to be updated). The same code worked perfectly on 10.x.See the attached backtrace below. Can we do something else to catch the bug?
Or can we hope for this bug to be already fixed and released in the upcoming
version?
Hmm, this one smells like c203d6cf81b4 -- haven't seen any fixes for
that one. Can you share more details on this? I think the failing
update is on table with oid=557732818, but I might be wrong.
--
Álvaro Herrera https://www.2ndQuadrant.com/
PostgreSQL Development, 24x7 Support, Remote DBA, Training & Services
Hmm, this one smells like c203d6cf81b4 -- haven't seen any fixes for
that one. Can you share more details on this? I think the failing
update is on table with oid=557732818, but I might be wrong.
That's exactly the table, public.schedulecard.
We issue an UPDATE changing some of its columns. E.g.,
UPDATE public.schedulecard SET ext_ident=null,
rotates=false,period_num=1,period_day=2 WHERE id=3817
lets the server crash. See the main log:
2018-11-06 17:29:40.031 CET [30202] LOG: server process (PID 29879) was
terminated by signal 11: Segmentation fault
2018-11-06 17:29:40.031 CET [30202] DETAIL: Failed process was running:
UPDATE public.schedulecard SET ext_ident=null,
rotates=false,period_num=1,period_day=2 WHERE id=3817;
select * from schedulecard where id = 3817
2018-11-06 17:29:40.031 CET [30202] LOG: terminating any other active
server processes
The query is reproducible - it always lets the server segfault. It
crashes on multiple rows on that table -- actually, I haven't found any
non-failing row yet.
I thought triggers should be suspected. However, even when all the three
triggers have been disabled (ALTER TABLE DISABLE TRIGGER), the UPDATE
crashed the server.
What else could I try?
Regards,
Ondřej Bouda
Dne 6.11.2018 v 19:52 Alvaro Herrera napsal(a):
Show quoted text
On 2018-Nov-06, Ondřej Bouda wrote:
So we dumped and restored all our databases. After that, the crash on DELETE
never occurred (before, it was several times a day). However, the crash on
UPDATE still occurs on specific rows. We are quite certain no ALTER TABLE
statement was executed on the table after the restore.
There are two AFTER INSERT OR UPDATE constraint triggers and one BEFORE
INSERT OR UPDATE trigger on the table, all of which are implemented in
plpgsql. Multiple physical servers, on separate databases with identical
schema, crash on the same type of UPDATE query (different just in concrete
values to be updated). The same code worked perfectly on 10.x.See the attached backtrace below. Can we do something else to catch the bug?
Or can we hope for this bug to be already fixed and released in the upcoming
version?Hmm, this one smells like c203d6cf81b4 -- haven't seen any fixes for
that one. Can you share more details on this? I think the failing
update is on table with oid=557732818, but I might be wrong.
On 2018-Nov-06, Ondřej Bouda wrote:
Hmm, this one smells like c203d6cf81b4 -- haven't seen any fixes for
that one. Can you share more details on this? I think the failing
update is on table with oid=557732818, but I might be wrong.That's exactly the table, public.schedulecard.
We issue an UPDATE changing some of its columns. E.g.,UPDATE public.schedulecard SET ext_ident=null,
rotates=false,period_num=1,period_day=2 WHERE id=3817
What indexes are there in this table? Indexes on expressions are
particularly suspect.
--
Álvaro Herrera https://www.2ndQuadrant.com/
PostgreSQL Development, 24x7 Support, Remote DBA, Training & Services
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
I thought triggers should be suspected. However, even when all the three
triggers have been disabled (ALTER TABLE DISABLE TRIGGER), the UPDATE
crashed the server.
Foreign-key triggers too?
What else could I try?
A stack trace would be really helpful.
https://wiki.postgresql.org/wiki/Generating_a_stack_trace_of_a_PostgreSQL_backend
regards, tom lane
Dne 6.11.2018 v 20:45 Alvaro Herrera napsal(a):
What indexes are there in this table? Indexes on expressions are
particularly suspect.
There are some simple btree indexes due to foreign keys, and this one,
which seems as the cause for the crashes:
CREATE INDEX schedulecard_overlap_idx
ON public.schedulecard USING gist
(scheduletemplate_id, (period_day::integer % 7), timerange)
TABLESPACE pg_default;
When I drop it, the UPDATE statement gets executed without any problems.
When I create the index again, the same UPDATE crashes the server.
Regards,
Ondřej Bouda
Alvaro Herrera <alvherre@2ndquadrant.com> writes:
What indexes are there in this table? Indexes on expressions are
particularly suspect.
I had not looked at the "projection index" code before, and now that
I have, I am desperately unhappy with it. It's seriously buggy,
badly underdocumented, unbelievably inefficient, and it looks like
it creates a whole new set of reasons for unwanted recursion inside
the relcache. The relcache has got NO business calling cost_qual_eval,
for example.
Having said that, I'm not real sure how it ends up with this crash.
It looks like ProjIndexIsUnchanged is getting the wrong value for
the index column's typbyval, but how could that be?
regards, tom lane
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
There are some simple btree indexes due to foreign keys, and this one,
which seems as the cause for the crashes:
CREATE INDEX schedulecard_overlap_idx
ON public.schedulecard USING gist
(scheduletemplate_id, (period_day::integer % 7), timerange)
TABLESPACE pg_default;
When I drop it, the UPDATE statement gets executed without any problems.
When I create the index again, the same UPDATE crashes the server.
Hm, what are the data types of those columns?
And I assume you've got btree_gist installed?
regards, tom lane
Foreign-key triggers too?
There are four trivial foreign keys from public.schedulecard like this:
ALTER TABLE public.schedulecard
ADD CONSTRAINT fk_schedulecard_schedulecard FOREIGN KEY
(schedulecard_id)
REFERENCES public.schedulecard (id) MATCH SIMPLE
ON UPDATE NO ACTION
ON DELETE RESTRICT;
(two of them having ON UPDATE CASCADE, but all other characteristics are
the same)
Also, several tables have foreign keys to public.schedulecard.id, some
of which are ON UPDATE CASCADE, others NO ACTION.
A stack trace would be really helpful.
Already sent earlier, maybe it got lost. Resending it:
[New LWP 8307]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
Core was generated by `postgres: 11/main: usr mydb 127.0.0.1(56829)
UPDATE '.
Program terminated with signal SIGSEGV, Segmentation fault.
#0 __memcmp_sse4_1 () at ../sysdeps/x86_64/multiarch/memcmp-sse4.S:793
#0 __memcmp_sse4_1 () at ../sysdeps/x86_64/multiarch/memcmp-sse4.S:793
No locals.
#1 0x00007f6a6b993296 in datumIsEqual (value1=12, value2=12,
typByVal=<optimized out>, typLen=16) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/utils/adt/datum.c:249
size1 = 16
size2 = <optimized out>
s1 = 0xc <error: Cannot access memory at address 0xc>
s2 = 0xc <error: Cannot access memory at address 0xc>
res = <optimized out>
#2 0x00007f6a6b6b89de in ProjIndexIsUnchanged (newtup=0x7f6a6d5ccdd0,
oldtup=0x7ffc9c1c1270, relation=0x7f6a6b4c3680) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4539
att = <optimized out>
indexOid = <optimized out>
indexDesc = 0x7f6a6b4c7cf0
indexInfo = 0x7f6a6d5cdbf8
i = 0
indexoidlist = <optimized out>
econtext = 0x7f6a6d4c2c10
new_isnull = {false, false, false, 156, 252, 127, false, false,
44, 29, 128, 107, 106, 127, false, false, 203, 89, 76, 107, 106, 127,
false, false, 123, false, false, false, false, false, false, false}
slot = 0x7f6a6d5cf8b8
equals = true
old_isnull = {false, false, false, 109, 106, 127, false, false,
69, 46, 80, 109, 106, 127, false, false, 64, 46, 80, 109, 106, 127,
false, false, 72, 46, 80, 109, 106, 127, false, false}
new_values = {12, 2, 140095078059546, 16, 140722927572064,
140095077232192, 140095077233456, 140722927572079, 0, 0,
140722927572048, 140095054460096, 140095077050704, 140095078061816, 5,
4, 140722927572096, 140095046814123, 140722927572096, 140095046825162,
140095043418528, 140095077051552, 140722927572224, 140095046865098,
60129542543, 23274993280, 140095043418528, 140095077050704,
140095043417728, 140095077050976, 140095078056288, 140095043422512}
indexno = 2
l = 0x7f6a6d503840
estate = 0x7f6a6d4c2a00
old_values = {12, 1, 140078631611970, 1, 140095077050704, 1024,
140095077232192, 0, 140722927571760, 140095049517261, 140722927571808,
140722927571776, 140722927571792, 140095046814329, 18, 140095077232200,
140095076976896, 140095078056288, 22, 100, 140722927571856,
140722927571920, 140095046831813, 140722927571856, 140095046842624, 0,
140095077226392, 3, 140095077232192, 140095077232528, 140095077232192,
140095078061816}
#3 heap_update (relation=relation@entry=0x7f6a6b4c3680,
otid=otid@entry=0x7ffc9c1c1690, newtup=newtup@entry=0x7f6a6d5ccdd0,
cid=0, crosscheck=<optimized out>, wait=wait@entry=true,
hufd=hufd@entry=0x7ffc9c1c15b0, lockmode=lockmode@entry=0x7ffc9c1c15a4)
at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/access/heap/heapam.c:4230
result = <optimized out>
xid = 245762845
hot_attrs = 0x7f6a6d503740
proj_idx_attrs = 0x7f6a6d503758
key_attrs = 0x7f6a6d503770
id_attrs = 0x7f6a6d503788
interesting_attrs = 0x7f6a6d5037a0
lp = <optimized out>
oldtup = {t_len = 85, t_self = {ip_blkid = {bi_hi = 0, bi_lo =
45}, ip_posid = 10}, t_tableOid = 557732818, t_data = 0x7f669913ee10}
heaptup = 0x7f6a6d5ccdd0
old_key_tuple = 0x0
old_key_copied = false
page = 0x7f669913d180 "]="
block = <optimized out>
mxact_status = <optimized out>
buffer = <optimized out>
newbuf = 14683
vmbuffer = 0
vmbuffer_new = 0
need_toast = <optimized out>
newtupsize = <optimized out>
pagefree = <optimized out>
have_tuple_lock = false
iscombo = false
use_hot_update = false
hot_attrs_checked = <optimized out>
key_intact = <optimized out>
all_visible_cleared = false
all_visible_cleared_new = false
checked_lockers = <optimized out>
locker_remains = <optimized out>
xmax_new_tuple = <optimized out>
xmax_old_tuple = 245762845
infomask_old_tuple = 0
infomask2_old_tuple = 8192
infomask_new_tuple = 144
infomask2_new_tuple = 0
__func__ = "heap_update"
#4 0x00007f6a6b82f2c9 in ExecUpdate
(mtstate=mtstate@entry=0x7f6a6d4d81c0, tupleid=0x7ffc9c1c1690,
oldtuple=0x0, slot=0x7f6a6d5cc160,
planSlot=planSlot@entry=0x7f6a6d567578,
epqstate=epqstate@entry=0x7f6a6d4d8280,
estate=estate@entry=0x7f6a6d4d6a60, canSetTag=true) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/nodeModifyTable.c:1209
lockmode = LockTupleNoKeyExclusive
partition_constraint_failed = false
tuple = 0x7f6a6d5ccdd0
resultRelInfo = 0x7f6a6d4d6ca0
resultRelationDesc = 0x7f6a6b4c3680
result = <optimized out>
hufd = {ctid = {ip_blkid = {bi_hi = 5616, bi_lo = 39964},
ip_posid = 32764}, xmax = 1803594893, cmax = 32618}
recheckIndexes = 0x0
saved_tcs_map = 0x0
__func__ = "ExecUpdate"
#5 0x00007f6a6b82f978 in ExecModifyTable (pstate=0x7f6a6d4d81c0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/nodeModifyTable.c:2166
node = 0x7f6a6d4d81c0
proute = 0x0
estate = 0x7f6a6d4d6a60
operation = CMD_UPDATE
saved_resultRelInfo = 0x0
resultRelInfo = 0x7f6a6d4d6ca0
subplanstate = 0x7f6a6d566988
junkfilter = 0x7f6a6d5cc038
slot = <optimized out>
tupleid = <optimized out>
tuple_ctid = {ip_blkid = {bi_hi = 0, bi_lo = 45}, ip_posid = 10}
oldtupdata = {t_len = 2619086544, t_self = {ip_blkid = {bi_hi =
32764, bi_lo = 0}, ip_posid = 9204}, t_tableOid = 32618, t_data =
0x7ffc9c1c16d0}
oldtuple = <optimized out>
__func__ = "ExecModifyTable"
#6 0x00007f6a6b80b25b in ExecProcNode (node=0x7f6a6d4d81c0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/include/executor/executor.h:237
No locals.
#7 ExecutePlan (execute_once=<optimized out>, dest=0x7f6a6d5e9448,
direction=<optimized out>, numberTuples=0, sendTuples=false,
operation=CMD_UPDATE, use_parallel_mode=<optimized out>,
planstate=0x7f6a6d4d81c0, estate=0x7f6a6d4d6a60) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/execMain.c:1723
slot = <optimized out>
current_tuple_count = 0
#8 standard_ExecutorRun (queryDesc=0x7f6a6d566040, direction=<optimized
out>, count=0, execute_once=<optimized out>) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/executor/execMain.c:364
estate = 0x7f6a6d4d6a60
operation = CMD_UPDATE
dest = 0x7f6a6d5e9448
sendTuples = <optimized out>
__func__ = "standard_ExecutorRun"
#9 0x00007f6a6b95b41d in ProcessQuery (plan=<optimized out>,
sourceText=0x7f6a6d3b45a0 "UPDATE public.schedulecard SET
ext_ident=NULL, finalreport_absence_cnt=NULL, period_day=2,
period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"...,
params=0x0, queryEnv=0x0, dest=0x7f6a6d5e9448,
completionTag=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:161
queryDesc = 0x7f6a6d566040
#10 0x00007f6a6b95b668 in PortalRunMulti
(portal=portal@entry=0x7f6a6d479d00, isTopLevel=isTopLevel@entry=true,
setHoldSnapshot=setHoldSnapshot@entry=false,
dest=dest@entry=0x7f6a6d5e9448, altdest=altdest@entry=0x7f6a6d5e9448,
completionTag=completionTag@entry=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:1286
pstmt = 0x7f6a6d5e92e8
active_snapshot_set = true
stmtlist_item = 0x7f6a6d5e93f8
#11 0x00007f6a6b95c2d5 in PortalRun (portal=portal@entry=0x7f6a6d479d00,
count=count@entry=9223372036854775807, isTopLevel=isTopLevel@entry=true,
run_once=run_once@entry=true, dest=dest@entry=0x7f6a6d5e9448,
altdest=altdest@entry=0x7f6a6d5e9448,
completionTag=completionTag@entry=0x7ffc9c1c19d0 "") at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/pquery.c:799
save_exception_stack = 0x7ffc9c1c1c00
save_context_stack = 0x0
local_sigjmp_buf = {{__jmpbuf = {140722927574016,
7153736072036697610, 140095075869728, 140722927573456, 140095076670720,
140095075869776, 7153736071992657418, 7091693995611473418},
__mask_was_saved = 0, __saved_mask = {__val = {0, 140723125634669, 0,
140095051070678, 64, 112, 140095075869728, 140095075861648,
140095078175768, 140722927573328, 140095049517496, 140722927573360, 2,
140095075869728, 2, 140722927573360}}}}
result = <optimized out>
nprocessed = <optimized out>
saveTopTransactionResourceOwner = 0x7f6a6d41b148
saveTopTransactionContext = 0x7f6a6d48d8d0
saveActivePortal = 0x0
saveResourceOwner = 0x7f6a6d41b148
savePortalContext = 0x0
saveMemoryContext = 0x7f6a6d48d8d0
__func__ = "PortalRun"
#12 0x00007f6a6b957f7f in exec_simple_query (query_string=0x7f6a6d3b45a0
"UPDATE public.schedulecard SET ext_ident=NULL,
finalreport_absence_cnt=NULL, period_day=2, period_num=1, rotates=false,
rotationgroup_id=NULL, schedulecard_id=NULL, schedulecardblock_id=NULL,
schedule"...) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/postgres.c:1122
parsetree = 0x7f6a6d3b6420
portal = 0x7f6a6d479d00
snapshot_set = <optimized out>
commandTag = <optimized out>
completionTag =
"\000\032\034\234\374\177\000\000\341\356\247kj\177\000\000\000\000\000\000\000\000\000\000\060\316\367kj\177\000\000\340&\360kj\177\000\000\234U\357kj\177\000\000\240E;mj\177\000\000Q\000\000\000\000\000\000"
querytree_list = <optimized out>
plantree_list = <optimized out>
receiver = 0x7f6a6d5e9448
format = 0
dest = DestRemote
parsetree_list = 0x7f6a6d3b6470
parsetree_item = 0x7f6a6d3b6450
save_log_statement_stats = false
was_logged = false
use_implicit_block = false
msec_str =
"\000\032\034\234\374\177\000\000\341\356\247kj\177\000\000\000\000\000\000\000\000\000\000\060\316\367kj\177\000"
__func__ = "exec_simple_query"
#13 0x00007f6a6b95930a in PostgresMain (argc=<optimized out>,
argv=argv@entry=0x7f6a6d400400, dbname=0x7f6a6d4003e0 "mydb",
username=<optimized out>) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/tcop/postgres.c:4159
query_string = 0x7f6a6d3b45a0 "UPDATE public.schedulecard SET
ext_ident=NULL, finalreport_absence_cnt=NULL, period_day=2,
period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"...
firstchar = 81
input_message = {data = 0x7f6a6d3b45a0 "UPDATE
public.schedulecard SET ext_ident=NULL, finalreport_absence_cnt=NULL,
period_day=2, period_num=1, rotates=false, rotationgroup_id=NULL,
schedulecard_id=NULL, schedulecardblock_id=NULL, schedule"..., len =
328, maxlen = 1024, cursor = 328}
local_sigjmp_buf = {{__jmpbuf = {140095054460088,
7153736071902479882, 140095054460096, 1, 0, 140095076143920,
7153736071933937162, 7091693993451144714}, __mask_was_saved = 1,
__saved_mask = {__val = {0, 140095076143920, 140095004765576,
844424930131970, 206158430256, 140722927574360, 140722927574144, 293,
140095076143920, 0, 0, 140095075861648, 1024, 140722927574468, 0,
140722927574240}}}}
send_ready_for_query = false
disable_idle_in_transaction_timeout = false
__func__ = "PostgresMain"
#14 0x00007f6a6b67867d in BackendRun (port=0x7f6a6d3f9330) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:4361
ac = 1
secs = 594683937
usecs = 521905
i = 1
av = 0x7f6a6d400400
maxac = <optimized out>
#15 BackendStartup (port=0x7f6a6d3f9330) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:4033
bn = <optimized out>
pid = <optimized out>
#16 ServerLoop () at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:1706
rmask = {fds_bits = {8, 0 <repeats 15 times>}}
selres = <optimized out>
now = <optimized out>
readmask = {fds_bits = {200, 0 <repeats 15 times>}}
last_lockfile_recheck_time = 1541368681
last_touch_time = 1541366480
__func__ = "ServerLoop"
#17 0x00007f6a6b8e7644 in PostmasterMain (argc=5, argv=<optimized out>)
at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/postmaster/postmaster.c:1379
opt = <optimized out>
status = <optimized out>
userDoption = <optimized out>
listen_addr_saved = true
i = <optimized out>
output_config_variable = <optimized out>
__func__ = "PostmasterMain"
#18 0x00007f6a6b679616 in main (argc=5, argv=0x7f6a6d3af1f0) at
/build/postgresql-11-oDwOcQ/postgresql-11-11.0/build/../src/backend/main/main.c:228
No locals.
--
Regards,
Ond�ej Bouda
Hm, what are the data types of those columns?
scheduletemplate_id bigint NOT NULL,
period_day smallint NOT NULL,
timerange timerange NOT NULL,
where timerange is defined as follows:
CREATE TYPE public.timerange AS RANGE
(
SUBTYPE=time,
SUBTYPE_OPCLASS = time_ops
);
And I assume you've got btree_gist installed?
Yes, version 1.5.
Regards,
Ond�ej Bouda
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
Hm, what are the data types of those columns?
scheduletemplate_id bigint NOT NULL,
period_day smallint NOT NULL,
timerange timerange NOT NULL,
OK, so here's a minimal reproducer:
drop table schedulecard;
create table schedulecard (
scheduletemplate_id bigint NOT NULL,
period_day smallint NOT NULL
);
CREATE INDEX schedulecard_overlap_idx
ON schedulecard USING gist
(scheduletemplate_id, (period_day::integer % 7));
insert into schedulecard values(12, 1);
update schedulecard set period_day = period_day + 7;
Interestingly, it doesn't crash if I change the index type to btree,
which I was not expecting because the crashing code seems pretty
independent of the index type.
Haven't traced further than that yet.
regards, tom lane
I wrote:
Interestingly, it doesn't crash if I change the index type to btree,
which I was not expecting because the crashing code seems pretty
independent of the index type.
Oh ... duh. The problem here is that ProjIndexIsUnchanged thinks that
the type of the index column is identical to the type of the source
datum for it, which is not true for any opclass making use of the
opckeytype property.
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.
regards, tom lane
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.
Thanks for the tip. I am unsuccessful using it, though:
# ALTER INDEX public.schedulecard_overlap_idx SET (recheck_on_update =
FALSE);
ERROR: unrecognized parameter "recheck_on_update"
Creating a new index is wrong, too:
# CREATE INDEX schedulecard_overlap_idx2
ON public.schedulecard USING gist
(scheduletemplate_id, (period_day::integer % 7), timerange)
WITH (recheck_on_update = FALSE);
ERROR: unrecognized parameter "recheck_on_update"
It only succeeds if not USING gist:
# CREATE INDEX schedulecard_overlap_idx2
ON public.schedulecard
(scheduletemplate_id, (period_day::integer % 7), timerange)
WITH (recheck_on_update = FALSE);
CREATE INDEX
Is there any other workaround for a gist index, please?
Maybe we will just drop the index until the bug gets fixed - better slow
queries than crashing servers...
Thanks,
Ondřej Bouda
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.
Thanks for the tip. I am unsuccessful using it, though:
# ALTER INDEX public.schedulecard_overlap_idx SET (recheck_on_update =
FALSE);
ERROR: unrecognized parameter "recheck_on_update"
Oh, for crying out loud. That's yet a different bug.
I'm not sure that it's the fault of the recheck_on_update
feature proper though; it might be a pre-existing bug in
the reloptions code. Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?
regards, tom lane
On 2018-Nov-06, Tom Lane wrote:
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.Thanks for the tip. I am unsuccessful using it, though:
# ALTER INDEX public.schedulecard_overlap_idx SET (recheck_on_update =
FALSE);
ERROR: unrecognized parameter "recheck_on_update"Oh, for crying out loud. That's yet a different bug.
I'm not sure that it's the fault of the recheck_on_update
feature proper though; it might be a pre-existing bug in
the reloptions code. Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?
RELOPT_KIND_INDEX was invented by that commit, looks like :-(
--
Álvaro Herrera https://www.2ndQuadrant.com/
PostgreSQL Development, 24x7 Support, Remote DBA, Training & Services
On 2018-11-06 16:47:20 -0500, Tom Lane wrote:
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.Thanks for the tip. I am unsuccessful using it, though:
# ALTER INDEX public.schedulecard_overlap_idx SET (recheck_on_update =
FALSE);
ERROR: unrecognized parameter "recheck_on_update"Oh, for crying out loud. That's yet a different bug.
I'm not sure that it's the fault of the recheck_on_update
feature proper though; it might be a pre-existing bug in
the reloptions code. Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?
Looks new:
+ RELOPT_KIND_INDEX = RELOPT_KIND_BTREE|RELOPT_KIND_HASH|RELOPT_KIND_GIN|RELOPT_KIND_SPGIST,
there aren't any other "for all indexes" type options, so the whole
category didn't exist before.
It also strikes me as a really bad idea, even if RELOPT_KIND_GIST
wouldn't have been omitted: It breaks index am extensibility.
Greetings,
Andres Freund
On 11/6/18 10:54 PM, Andres Freund wrote:
On 2018-11-06 16:47:20 -0500, Tom Lane wrote:
=?UTF-8?Q?Ond=c5=99ej_Bouda?= <obouda@email.cz> writes:
Ondřej, as a short-term workaround you could prevent the crash
by setting that index's recheck_on_update property to false.Thanks for the tip. I am unsuccessful using it, though:
# ALTER INDEX public.schedulecard_overlap_idx SET (recheck_on_update =
FALSE);
ERROR: unrecognized parameter "recheck_on_update"Oh, for crying out loud. That's yet a different bug.
I'm not sure that it's the fault of the recheck_on_update
feature proper though; it might be a pre-existing bug in
the reloptions code. Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?Looks new:
+ RELOPT_KIND_INDEX = RELOPT_KIND_BTREE|RELOPT_KIND_HASH|RELOPT_KIND_GIN|RELOPT_KIND_SPGIST,there aren't any other "for all indexes" type options, so the whole
category didn't exist before.It also strikes me as a really bad idea, even if RELOPT_KIND_GIST
wouldn't have been omitted: It breaks index am extensibility.
Does it? The RELOPT_KIND_* stuff is hard-coded in reloptions.h anyway,
so I'm not sure how this particular thing makes it less extensible?
That being said, we also have RELOPT_KIND_BRIN, and that seems to be
missing from RELOPT_KIND_INDEX too (and AFAICS the optimization works
for all index types).
regards
--
Tomas Vondra http://www.2ndQuadrant.com
PostgreSQL Development, 24x7 Support, Remote DBA, Training & Services
Andres Freund <andres@anarazel.de> writes:
On 2018-11-06 16:47:20 -0500, Tom Lane wrote:
Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?
Looks new:
+ RELOPT_KIND_INDEX = RELOPT_KIND_BTREE|RELOPT_KIND_HASH|RELOPT_KIND_GIN|RELOPT_KIND_SPGIST,
there aren't any other "for all indexes" type options, so the whole
category didn't exist before.
It also strikes me as a really bad idea, even if RELOPT_KIND_GIST
wouldn't have been omitted: It breaks index am extensibility.
Hm, well, that enum already knows about all index types, doesn't it?
regards, tom lane
Hi,
On 2018-11-06 23:11:29 +0100, Tomas Vondra wrote:
On 11/6/18 10:54 PM, Andres Freund wrote:
Looks new:
+ RELOPT_KIND_INDEX = RELOPT_KIND_BTREE|RELOPT_KIND_HASH|RELOPT_KIND_GIN|RELOPT_KIND_SPGIST,there aren't any other "for all indexes" type options, so the whole
category didn't exist before.It also strikes me as a really bad idea, even if RELOPT_KIND_GIST
wouldn't have been omitted: It breaks index am extensibility.Does it? The RELOPT_KIND_* stuff is hard-coded in reloptions.h anyway,
so I'm not sure how this particular thing makes it less extensible?
Well, you can create new index AMs in extensions these days, but given
the relopt design above, the feature cannot be disabled for them. Yes,
there's *currently* probably no great way to have reloptions across all
potential index types, but that's not an excuse for adding something
broken.
Greetings,
Andres Freund
Hi,
On 2018-11-06 17:11:40 -0500, Tom Lane wrote:
Andres Freund <andres@anarazel.de> writes:
On 2018-11-06 16:47:20 -0500, Tom Lane wrote:
Looks like somebody forgot to list
RELOPT_KIND_GIST in RELOPT_KIND_INDEX, but is that the
fault of commit c203d6cf8 or was it busted before?Looks new:
+ RELOPT_KIND_INDEX = RELOPT_KIND_BTREE|RELOPT_KIND_HASH|RELOPT_KIND_GIN|RELOPT_KIND_SPGIST,
there aren't any other "for all indexes" type options, so the whole
category didn't exist before.It also strikes me as a really bad idea, even if RELOPT_KIND_GIST
wouldn't have been omitted: It breaks index am extensibility.Hm, well, that enum already knows about all index types, doesn't it?
Not quite sure what you mean.
Before c203d6cf8 there weren't reloptions across index types. But after
it, if one adds a new index AM via an extension, one can't set
recheck_on_update = false for indexes using it, even though the feature
affects such indexes. We support adding indexes AMs at runtime these
days, including WAL logging (even though that's a bit
voluminous). There's even a contrib index AM...
The list of AMs is supposed to be extensible at runtime, cf
add_reloption_kind().
Greetings,
Andres Freund
For the record:
Regarding backend crash when DELETEing tuples older than
a recent ALTER TABLE ADD COLUMN:
On Fri, Nov 02, 2018 at 11:56:58PM -0400, Tom Lane wrote:
I was feeling baffled about this, but it suddenly occurs to me that maybe
the bug fixed in 040a1df61/372102b81 explains this.So, I guess I can work around the issue by the above
manoeuvre and report back once 040a1df61/372102b81 is
released.I will, at any rate, report back when the existing fix is released.
Now that PG11.1 is released on Debian
postgresql-11:
Installiert: 11.1-1
Installationskandidat: 11.1-1
Versionstabelle:
*** 11.1-1 500
500 http://httpredir.debian.org/debian unstable/main i386 Packages
100 /var/lib/dpkg/status
11.0-1+b1 990
990 http://httpredir.debian.org/debian buster/main i386 Packages
I can report that my issued is fixed by that version.
Thanks to all,
Karsten
--
GPG 40BE 5B0E C98E 1713 AFA6 5BC0 3BEA AC80 7D4F C89B