BUG #16172: failure of vacuum file truncation can cause permanent data corruption

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#1PG Bug reporting form
noreply@postgresql.org

The following bug has been logged on the website:

Bug reference: 16172
Logged by: TAKATSUKA Haruka
Email address: harukat@sraoss.co.jp
PostgreSQL version: 12.1
Operating system: Windows/Linux
Description:

Hello, pgsql hackers,

I found that failure of vacuum file truncation can cause permanent data
corruption.
I am reporting the reproduce steps below.

In Windows installation, the truncation sometime fails by permission
denied error because of anti-virus software. It has caused just ERROR
and people have offen dismissed it.

Truncation failure can also make the standby panic with the following
messages when replaying Heap2/VISIBLE or Heap2/CLEAN, because truncation
wal is emitted even if it doesn't complete actually in the primary.

WARNING: page .. of relation base/..../.... does not exist
CONTEXT: WAL redo at ..... for ....: cutoff xid ... flags ...
PANIC: WAL contains references to invalid pages

I think truncation failure is to be handled as more severe level.
Any thoughts?

with best regards,
Haruka Takatsuka / SRA OSS, Inc. Japan

reproduce steps (PG12)
======================

$ psql -U postgres -d db1
Pager usage is off.
psql (12.1)
Type "help" for help.

db1=#

$ gdb -p {its backend process}

(gdb) b FileTruncate
Breakpoint 1 at 0x73d320: file fd.c, line 2057.
(gdb) c
Continuing.

db1=# SHOW autovacuum;
autovacuum
------------
off
(1 row)

db1=# CREATE TABLE t1 (id int primary key, v text);
CREATE

db1=# INSERT INTO t1 SELECT g, md5(g::text) FROM generate_series(1, 10000)
as g;
INSERT 0 10000

db1=# CHECKPOINT;

Program received signal SIGUSR1, User defined signal 1.
0x00000036caae91a3 in __epoll_wait_nocancel () from /lib64/libc.so.6
(gdb) c
Continuing.

CHECKPOINT

db1=# DELETE FROM t1 WHERE id > 50;
DELETE 9950

db1=# VACUUM t1;

Breakpoint 1, FileTruncate (file=59, offset=8192,
wait_event_info=167772175)
at fd.c:2057
2057 {
(gdb) n
2065 returnCode = FileAccess(file);
(gdb) n
2066 if (returnCode < 0)
(gdb) p returnCode = -100
$6 = -100
(gdb) c
Continuing.

ERROR: could not truncate file "base/16384/16645" to 1 blocks: Success

db1=# SELECT count(*) FROM t1;
count
-------
9930
(1 row)

db1=# SELECT * FROM t1 WHERE id > 50 LIMIT 10;
id | v
-----+----------------------------------
121 | 4c56ff4ce4aaf9573aa5dff913df997a
122 | a0a080f42e6f13b3a2df133f073095dd
123 | 202cb962ac59075b964b07152d234b70
124 | c8ffe9a587b126f152ed3d89a146b445
125 | 3def184ad8f4755ff269862ea77393dd
126 | 069059b7ef840f0c74a814ec9237b6ec
127 | ec5decca5ed3d6b8079e2e7e7bacc9f2
128 | 76dc611d6ebaafc66cc0879c71b5db5c
129 | d1f491a404d6854880943e5c3cd9ca25
130 | 9b8619251a19057cff70779273e95aa6
(10 rows)

db1=# VACUUM FULL FREEZE t1;
VACUUM

db1=# REINDEX TABLE t1;
REINDEX

db1=# SELECT count(*) FROM t1;
count
-------
9930
(1 row)

db1=# SELECT * FROM t1 WHERE id > 50 LIMIT 10;
id | v
-----+----------------------------------
121 | 4c56ff4ce4aaf9573aa5dff913df997a
122 | a0a080f42e6f13b3a2df133f073095dd
123 | 202cb962ac59075b964b07152d234b70
124 | c8ffe9a587b126f152ed3d89a146b445
125 | 3def184ad8f4755ff269862ea77393dd
126 | 069059b7ef840f0c74a814ec9237b6ec
127 | ec5decca5ed3d6b8079e2e7e7bacc9f2
128 | 76dc611d6ebaafc66cc0879c71b5db5c
129 | d1f491a404d6854880943e5c3cd9ca25
130 | 9b8619251a19057cff70779273e95aa6
(10 rows)

real incident log sample (from Windows PG10.x)
==============================================

primary server:
---------------
2019-12-17 19:10:19 JST [14321] ERROR: 42501: could not truncate file
"base/444807/447791" to 7 blocks: Permission denied
2019-12-17 19:10:19 JST [14321] CONTEXT: automatic vacuum of table
"ddd.ssss.tttt"

hot standby server:
-------------------
2019-12-17 19:11:20 JST [12345] WARNING: 01000: page 7 of relation
base/444807/447791 does not exist
2019-12-17 19:11:20 JST [12345] CONTEXT: WAL redo at 4E/FC5AD060 for
Heap2/VISIBLE: cutoff xid 0 flags 3
2019-12-17 19:11:20 JST [12345] PANIC: XX000: WAL contains references to
invalid pages
2019-12-17 19:11:20 JST [12345] CONTEXT: WAL redo at 4E/FC5AD060 for
Heap2/VISIBLE: cutoff xid 0 flags 3

#2TAKATSUKA Haruka
harukat@sraoss.co.jp
In reply to: PG Bug reporting form (#1)
Re: BUG #16172: failure of vacuum file truncation can cause permanent data corruption

I also tested PostgreSQL with the attached patch avoided this data
corruption. The patch just removes DropRelFileNodeBuffers() from
smgrtruncate().

On Thu, 19 Dec 2019 07:14:42 +0000
PG Bug reporting form <noreply@postgresql.org> wrote:

The following bug has been logged on the website:

Bug reference: 16172
Logged by: TAKATSUKA Haruka
Email address: harukat@sraoss.co.jp
PostgreSQL version: 12.1
Operating system: Windows/Linux
Description:

Hello, pgsql hackers,

I found that failure of vacuum file truncation can cause permanent data
corruption.
I am reporting the reproduce steps below.

In Windows installation, the truncation sometime fails by permission
denied error because of anti-virus software. It has caused just ERROR
and people have offen dismissed it.

Truncation failure can also make the standby panic with the following
messages when replaying Heap2/VISIBLE or Heap2/CLEAN, because truncation
wal is emitted even if it doesn't complete actually in the primary.

WARNING: page .. of relation base/..../.... does not exist
CONTEXT: WAL redo at ..... for ....: cutoff xid ... flags ...
PANIC: WAL contains references to invalid pages

I think truncation failure is to be handled as more severe level.
Any thoughts?

with best regards,
Haruka Takatsuka / SRA OSS, Inc. Japan

reproduce steps (PG12)
======================

$ psql -U postgres -d db1
Pager usage is off.
psql (12.1)
Type "help" for help.

db1=#

$ gdb -p {its backend process}

(gdb) b FileTruncate
Breakpoint 1 at 0x73d320: file fd.c, line 2057.
(gdb) c
Continuing.

db1=# SHOW autovacuum;
autovacuum
------------
off
(1 row)

db1=# CREATE TABLE t1 (id int primary key, v text);
CREATE

db1=# INSERT INTO t1 SELECT g, md5(g::text) FROM generate_series(1, 10000)
as g;
INSERT 0 10000

db1=# CHECKPOINT;

Program received signal SIGUSR1, User defined signal 1.
0x00000036caae91a3 in __epoll_wait_nocancel () from /lib64/libc.so.6
(gdb) c
Continuing.

CHECKPOINT

db1=# DELETE FROM t1 WHERE id > 50;
DELETE 9950

db1=# VACUUM t1;

Breakpoint 1, FileTruncate (file=59, offset=8192,
wait_event_info=167772175)
at fd.c:2057
2057 {
(gdb) n
2065 returnCode = FileAccess(file);
(gdb) n
2066 if (returnCode < 0)
(gdb) p returnCode = -100
$6 = -100
(gdb) c
Continuing.

ERROR: could not truncate file "base/16384/16645" to 1 blocks: Success

db1=# SELECT count(*) FROM t1;
count
-------
9930
(1 row)

(snip)

Attachments:

12stable_dont_drop_buffer.difftext/plain; name=12stable_dont_drop_buffer.diffDownload+0-6
#3TAKATSUKA Haruka
harukat@sraoss.co.jp
In reply to: TAKATSUKA Haruka (#2)
Re: BUG #16172: failure of vacuum file truncation can cause permanent data corruption

I found moving DropRelFileNodeBuffers() from top to end in function
smgrtruncate() is a proper modification. It passed the regression test
and this reproduction test.

with best regards,
Haruka Takatsuka / SRA OSS, Inc. Japan

On Fri, 20 Dec 2019 10:19:52 +0900
TAKATSUKA Haruka <harukat@sraoss.co.jp> wrote:

I also tested PostgreSQL with the attached patch avoided this data
corruption. The patch just removes DropRelFileNodeBuffers() from
smgrtruncate().

On Thu, 19 Dec 2019 07:14:42 +0000
PG Bug reporting form <noreply@postgresql.org> wrote:

The following bug has been logged on the website:

Bug reference: 16172
Logged by: TAKATSUKA Haruka
Email address: harukat@sraoss.co.jp
PostgreSQL version: 12.1
Operating system: Windows/Linux
Description:

Hello, pgsql hackers,

I found that failure of vacuum file truncation can cause permanent data
corruption.
I am reporting the reproduce steps below.

In Windows installation, the truncation sometime fails by permission
denied error because of anti-virus software. It has caused just ERROR
and people have offen dismissed it.

Truncation failure can also make the standby panic with the following
messages when replaying Heap2/VISIBLE or Heap2/CLEAN, because truncation
wal is emitted even if it doesn't complete actually in the primary.

WARNING: page .. of relation base/..../.... does not exist
CONTEXT: WAL redo at ..... for ....: cutoff xid ... flags ...
PANIC: WAL contains references to invalid pages

I think truncation failure is to be handled as more severe level.
Any thoughts?

with best regards,
Haruka Takatsuka / SRA OSS, Inc. Japan

reproduce steps (PG12)
======================

$ psql -U postgres -d db1
Pager usage is off.
psql (12.1)
Type "help" for help.

db1=#

$ gdb -p {its backend process}

(gdb) b FileTruncate
Breakpoint 1 at 0x73d320: file fd.c, line 2057.
(gdb) c
Continuing.

db1=# SHOW autovacuum;
autovacuum
------------
off
(1 row)

db1=# CREATE TABLE t1 (id int primary key, v text);
CREATE

db1=# INSERT INTO t1 SELECT g, md5(g::text) FROM generate_series(1, 10000)
as g;
INSERT 0 10000

db1=# CHECKPOINT;

Program received signal SIGUSR1, User defined signal 1.
0x00000036caae91a3 in __epoll_wait_nocancel () from /lib64/libc.so.6
(gdb) c
Continuing.

CHECKPOINT

db1=# DELETE FROM t1 WHERE id > 50;
DELETE 9950

db1=# VACUUM t1;

Breakpoint 1, FileTruncate (file=59, offset=8192,
wait_event_info=167772175)
at fd.c:2057
2057 {
(gdb) n
2065 returnCode = FileAccess(file);
(gdb) n
2066 if (returnCode < 0)
(gdb) p returnCode = -100
$6 = -100
(gdb) c
Continuing.

ERROR: could not truncate file "base/16384/16645" to 1 blocks: Success

db1=# SELECT count(*) FROM t1;
count
-------
9930
(1 row)

(snip)

______________________________________________________________________
高塚 遥 harukat@sraoss.co.jp SRA OSS, Inc. http://www.sraoss.co.jp
〒171-0022 東京都豊島区南池袋2-32-8
TEL: 03-5979-2701 FAX: 03-5979-2702 CellPhone: 080-1292-3396

Attachments:

12stable_move_bufferdrop.difftext/plain; name=12stable_move_bufferdrop.diffDownload+6-6
#4Kyotaro Horiguchi
horikyota.ntt@gmail.com
In reply to: TAKATSUKA Haruka (#3)
Re: BUG #16172: failure of vacuum file truncation can cause permanent data corruption

Hello,

At Fri, 20 Dec 2019 11:00:28 +0900, TAKATSUKA Haruka <harukat@sraoss.co.jp> wrote in

I found moving DropRelFileNodeBuffers() from top to end in function
smgrtruncate() is a proper modification. It passed the regression test
and this reproduction test.

I don't recall clealy but I think there was a thread similar to this
issue. Assume that checkpoint was running concurrently, the
checkpoint can revive the just truncated blocks inadvertently with
bogus content.

reagards.

--
Kyotaro Horiguchi
NTT Open Source Software Center

#5TAKATSUKA Haruka
harukat@sraoss.co.jp
In reply to: Kyotaro Horiguchi (#4)
Re: BUG #16172: failure of vacuum file truncation can cause permanent data corruption

Horiguchi-san

Thanks for pointing out it.
I wasn't looking for past arguments enough.

You may mean this links are:

/messages/by-id/2348.1544474335@sss.pgh.pa.us
/messages/by-id/15667-8d3fca4eba25174f@postgresql.org

regards,
TAKATSUKA Haruka

On Fri, 20 Dec 2019 14:22:22 +0900 (JST)
Kyotaro Horiguchi <horikyota.ntt@gmail.com> wrote:

Show quoted text

Hello,

At Fri, 20 Dec 2019 11:00:28 +0900, TAKATSUKA Haruka <harukat@sraoss.co.jp> wrote in

I found moving DropRelFileNodeBuffers() from top to end in function
smgrtruncate() is a proper modification. It passed the regression test
and this reproduction test.

I don't recall clealy but I think there was a thread similar to this
issue. Assume that checkpoint was running concurrently, the
checkpoint can revive the just truncated blocks inadvertently with
bogus content.

reagards.

--
Kyotaro Horiguchi
NTT Open Source Software Center