Correct docs about GiST leaf page structure

Started by Paul Jungwirth3 months ago6 messagesdocs
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#1Paul Jungwirth
pj@illuminatedcomputing.com

Our docs for GiST indexes say the compress function is only used for
internal pages, not leaf pages, but actually it is used everywhere.
Here are two patches to clean things up.

You can see that we store compressed values with the pageinspect
extension. For instance, multiranges are compressed to ranges. Here
they are in leaf pages:

[v19devel:5432][314069] postgres=# create table mr (id int4multirange);
CREATE TABLE
[v19devel:5432][314069] postgres=# create index idx_mr on mr using gist (id);
CREATE INDEX
[v19devel:5432][314069] postgres=# insert into mr values ('{[1,2)}'),
('{[2,3)}');
INSERT 0 2
[v19devel:5432][314069] postgres=# select * from
gist_page_opaque_info(get_raw_page('idx_mr', 0));
lsn | nsn | rightlink | flags
------------+------------+------------+--------
0/01917320 | 0/00000000 | 4294967295 | {leaf}
(1 row)

[v19devel:5432][314069] postgres=# select * from
gist_page_items(get_raw_page('idx_mr', 0), 'idx_mr');
itemoffset | ctid | itemlen | dead | keys
------------+-------+---------+------+----------------
1 | (0,1) | 24 | f | (id)=("[1,2)")
2 | (0,2) | 24 | f | (id)=("[2,3)")

Similarly, btree_gist stores gbtreekey entries in leaf pages:

[v19devel:5432][314069] postgres=# create table i (id int);
CREATE TABLE
[v19devel:5432][314069] postgres=# create index idx_i on i using gist (id);
CREATE INDEX
[v19devel:5432][314069] postgres=# insert into i values (1), (2), (3);
INSERT 0 3
[v19devel:5432][314069] postgres=# select * from
gist_page_items(get_raw_page('idx_i', 0), 'idx_i');
ERROR: cannot display a value of type gbtreekey?
[v19devel:5432][314069] postgres=# select * from
gist_page_items_bytea(get_raw_page('idx_i', 0));
itemoffset | ctid | itemlen | dead | key_data
------------+-------+---------+------+------------------------------------
1 | (0,1) | 16 | f | \x00000000010010000100000001000000
2 | (0,2) | 16 | f | \x00000000020010000200000002000000
3 | (0,3) | 16 | f | \x00000000030010000300000003000000

I think this error goes back to the second GiST paper referenced in
access/gist/README, titled "Concurrency and Recovery in Generalized
Search Trees" (from 1997). On page 2 it says that internal pages store
the predicate and leaf pages store the key. (The original 1995 paper
doesn't differentiate like that though.) Since our README has a list
of ways that our implementation diverges from the research, I added a
note there as well.

I've also supplied a patch to clarify that there are two papers. The
old wording is a bit confusing:

GiST stands for Generalized Search Tree. It was introduced in the seminal paper
"Generalized Search Trees for Database Systems", 1995, Joseph M. Hellerstein,
Jeffrey F. Naughton, Avi Pfeffer:

http://www.sai.msu.su/~megera/postgres/gist/papers/gist.ps
https://dsf.berkeley.edu/papers/sigmod97-gist.pdf

Clarifying the two papers helps me call out the leaf page difference
in the main patch.

Yours,

--
Paul ~{:-)
pj@illuminatedcomputing.com

Attachments:

v1-0002-Correct-GiST-documentation-about-compressed-value.patchtext/x-patch; charset=US-ASCII; name=v1-0002-Correct-GiST-documentation-about-compressed-value.patchDownload+5-4
v1-0001-Clarify-GiST-README-references-to-the-original-re.patchtext/x-patch; charset=US-ASCII; name=v1-0001-Clarify-GiST-README-references-to-the-original-re.patchDownload+5-2
#2Tom Lane
tgl@sss.pgh.pa.us
In reply to: Paul Jungwirth (#1)
Re: Correct docs about GiST leaf page structure

Paul A Jungwirth <pj@illuminatedcomputing.com> writes:

Our docs for GiST indexes say the compress function is only used for
internal pages, not leaf pages, but actually it is used everywhere.
Here are two patches to clean things up.

You can see that we store compressed values with the pageinspect
extension. For instance, multiranges are compressed to ranges. Here
they are in leaf pages:

Actually I think it's more complicated than that. A GiST opclass
can choose whether to compress leaf-key entries, and if it does it
can use a different representation than it does on internal pages.
You can see that in action in compress/decompress functions that
pay attention to the GISTENTRY.leafkey flag, which many do.

So I'm inclined to propose text more like the attached. I merged
your two patches into one (didn't seem all that useful to separate).
Also, I dropped the adjacent sentence suggesting using the STORAGE
option. AFAIK that's pretty useless here: I don't think any GiST
code pays attention to it. At least part of the reason is that it's
inadequate to describe the possibility that leaf and internal datums
are different.

Thoughts?

regards, tom lane

Attachments:

v2-0001-Correct-GiST-documentation-about-compressed-value.patchtext/x-diff; charset=us-ascii; name*0=v2-0001-Correct-GiST-documentation-about-compressed-value.p; name*1=atchDownload+16-7
#3Paul Jungwirth
pj@illuminatedcomputing.com
In reply to: Tom Lane (#2)
Re: Correct docs about GiST leaf page structure

On Sun, Mar 29, 2026 at 12:32 PM Tom Lane <tgl@sss.pgh.pa.us> wrote:

Paul A Jungwirth <pj@illuminatedcomputing.com> writes:

Our docs for GiST indexes say the compress function is only used for
internal pages, not leaf pages, but actually it is used everywhere.
Here are two patches to clean things up.

You can see that we store compressed values with the pageinspect
extension. For instance, multiranges are compressed to ranges. Here
they are in leaf pages:

Actually I think it's more complicated than that. A GiST opclass
can choose whether to compress leaf-key entries, and if it does it
can use a different representation than it does on internal pages.
You can see that in action in compress/decompress functions that
pay attention to the GISTENTRY.leafkey flag, which many do.

Ah, thanks for pointing that out!

So I'm inclined to propose text more like the attached. I merged
your two patches into one (didn't seem all that useful to separate).
Also, I dropped the adjacent sentence suggesting using the STORAGE
option. AFAIK that's pretty useless here: I don't think any GiST
code pays attention to it. At least part of the reason is that it's
inadequate to describe the possibility that leaf and internal datums
are different.

I think your changes are great. I agree about not needing two commits.
My only hesitation is removing the line about STORAGE. In btree_gist
we do declare the storage of many opclasses. But I'm not sure why. Is
it necessary? Does an opclass gain some advantage from it? Does core
use that information somehow? Especially if leaf keys might or might
not be the same type as internal keys, I'm not sure what value
declaring STORAGE can provide. (It must be for core's sake, not the
opclass's, right?)

Yours,

--
Paul ~{:-)
pj@illuminatedcomputing.com

#4Tom Lane
tgl@sss.pgh.pa.us
In reply to: Paul Jungwirth (#3)
Re: Correct docs about GiST leaf page structure

Paul A Jungwirth <pj@illuminatedcomputing.com> writes:

On Sun, Mar 29, 2026 at 12:32 PM Tom Lane <tgl@sss.pgh.pa.us> wrote:

Actually I think it's more complicated than that. A GiST opclass
can choose whether to compress leaf-key entries, and if it does it
can use a different representation than it does on internal pages.
You can see that in action in compress/decompress functions that
pay attention to the GISTENTRY.leafkey flag, which many do.

I think your changes are great. I agree about not needing two commits.
My only hesitation is removing the line about STORAGE. In btree_gist
we do declare the storage of many opclasses. But I'm not sure why. Is
it necessary? Does an opclass gain some advantage from it? Does core
use that information somehow? Especially if leaf keys might or might
not be the same type as internal keys, I'm not sure what value
declaring STORAGE can provide. (It must be for core's sake, not the
opclass's, right?)

Excellent questions, and thanks for holding my feet to the fire about
that ;-). Reading more closely, the STORAGE option does indeed do
something: it determines the declared data type of the index's column,
as stored in pg_attribute. And that's important because GiST uses
that datatype while forming or deforming index tuples. So it has to
be accurate --- but only to the extent of having the right
typlen/typbyval/typalign properties, because that's as much as
index_form_tuple() and related functions really care about. They
don't look into the contents of the entries, except for the length
word if it's typlen -1.

My claim that the leaf key representation can be different from upper
levels is still accurate, but both representations have to match the
typlen/typbyval/typalign properties of whatever type is mentioned
in STORAGE. (I was misled by the fact that the GiST code has
different "leafTupdesc" and "nonLeafTupdesc" tuple descriptors.
But leafTupdesc is just the standard rd_att descriptor made from
the index's pg_attribute entries, and nonLeafTupdesc differs from
it only in having removed any INCLUDE attributes.)

So here's a v3 that accounts for that. I also decided that we were
going in quite the wrong direction by cramming more info into the
summary paragraph early in gist.sgml. The general plan there is to
offer about a one-sentence description of each opclass method, and
then go into more detail as necessary in the per-method text below.
So I moved all this info down into the compress method's section.
This seems to me to read noticeably better.

regards, tom lane

Attachments:

v3-0001-Correct-GiST-documentation-about-compressed-value.patchtext/x-diff; charset=us-ascii; name*0=v3-0001-Correct-GiST-documentation-about-compressed-value.p; name*1=atchDownload+29-8
#5Paul Jungwirth
pj@illuminatedcomputing.com
In reply to: Tom Lane (#4)
Re: Correct docs about GiST leaf page structure

On Mon, Mar 30, 2026 at 3:06 PM Tom Lane <tgl@sss.pgh.pa.us> wrote:

Paul A Jungwirth <pj@illuminatedcomputing.com> writes:

On Sun, Mar 29, 2026 at 12:32 PM Tom Lane <tgl@sss.pgh.pa.us> wrote:

Actually I think it's more complicated than that. A GiST opclass
can choose whether to compress leaf-key entries, and if it does it
can use a different representation than it does on internal pages.
You can see that in action in compress/decompress functions that
pay attention to the GISTENTRY.leafkey flag, which many do.

I think your changes are great. I agree about not needing two commits.
My only hesitation is removing the line about STORAGE. In btree_gist
we do declare the storage of many opclasses. But I'm not sure why. Is
it necessary? Does an opclass gain some advantage from it? Does core
use that information somehow? Especially if leaf keys might or might
not be the same type as internal keys, I'm not sure what value
declaring STORAGE can provide. (It must be for core's sake, not the
opclass's, right?)

Excellent questions, and thanks for holding my feet to the fire about
that ;-). Reading more closely, the STORAGE option does indeed do
something: it determines the declared data type of the index's column,
as stored in pg_attribute. And that's important because GiST uses
that datatype while forming or deforming index tuples. So it has to
be accurate --- but only to the extent of having the right
typlen/typbyval/typalign properties, because that's as much as
index_form_tuple() and related functions really care about. They
don't look into the contents of the entries, except for the length
word if it's typlen -1.

My claim that the leaf key representation can be different from upper
levels is still accurate, but both representations have to match the
typlen/typbyval/typalign properties of whatever type is mentioned
in STORAGE. (I was misled by the fact that the GiST code has
different "leafTupdesc" and "nonLeafTupdesc" tuple descriptors.
But leafTupdesc is just the standard rd_att descriptor made from
the index's pg_attribute entries, and nonLeafTupdesc differs from
it only in having removed any INCLUDE attributes.)

So here's a v3 that accounts for that. I also decided that we were
going in quite the wrong direction by cramming more info into the
summary paragraph early in gist.sgml. The general plan there is to
offer about a one-sentence description of each opclass method, and
then go into more detail as necessary in the per-method text below.
So I moved all this info down into the compress method's section.
This seems to me to read noticeably better.

I appreciate the explanation! Your v3 text has a lot of good info. I like it.

--
Paul ~{:-)
pj@illuminatedcomputing.com

#6Tom Lane
tgl@sss.pgh.pa.us
In reply to: Paul Jungwirth (#5)
Re: Correct docs about GiST leaf page structure

Paul A Jungwirth <pj@illuminatedcomputing.com> writes:

I appreciate the explanation! Your v3 text has a lot of good info. I like it.

OK. Pushed after some trivial additional wordsmithing.

regards, tom lane